RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 APCP25054 2843 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 NKX2-6A6NCS4 301 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 B4DXG7 233 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 PCDH7O60245 1069 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 GLRA3O75311 464 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 ESRRBO95718 433 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 KRT6AP02538 564 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 KRT6BP04259 564 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 HSD3B1P14060 373 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 HSD3B2P26439 372 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 ABCD3P28288 659 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 KRT6CP48668 564 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 EMDP50402 254 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 NAGLUP54802 743 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 KRTAP10-9P60411 292 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 KCNJ2P63252 427 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 TFF3Q07654 80 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 ZNF628Q5EBL2 1059 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 TDRPQ86YL5 185 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 CCDC116Q8IYX3 515 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 OR52R1Q8NGF1 315 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 KAT2AQ92830 837 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 HGDQ93099 445 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 TP53INP1Q96A56 240 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 NODALQ96S42 347 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 ZFP64Q9NPA5 681 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 NPDC1Q9NQX5 325 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.34■□□□□ 0.057e-8■■■■■ 55
PDLIM7-201ENST00000355572 EHD3Q9NZN3 535 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 DCDC2Q9UHG0 476 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 UTS2RQ9UKP6 389 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 CCL27Q9Y4X3 112 aa15.34■□□□□ 0.05
PDLIM7-201ENST00000355572 CSMD2Q7Z408 3487 aa15.33■□□□□ 0.05
PDLIM7-201ENST00000355572 C2orf72A6NCS6 295 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 C17orf51A8MQB3 221 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 AQP7O14520 342 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 ULK1O75385 1050 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 ABCB1P08183 1280 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 MYL2P10916 166 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 TIA1P31483 386 aaKnown RBP eCLIP15.33■□□□□ 0.041e-6■□□□□ 11.1
PDLIM7-201ENST00000355572 ADH7P40394 386 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 PKNOX1P55347 436 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 WNT3P56703 355 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 VSNL1P62760 191 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 TRA2BP62995 288 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 SLC18A2Q05940 514 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 PMPCAQ10713 525 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 SLC10A1Q14973 349 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 PCLAFQ15004 111 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 RPS6KA2Q15349 733 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 ZNF585AQ6P3V2 769 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 RGS9BPQ6ZS82 235 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 FRMD7Q6ZUT3 714 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 SEM1Q6ZVN7 128 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 LIX1LQ8IVB5 337 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 EIF1ADQ8N9N8 165 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 C7orf57Q8NEG2 295 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 OR9A2Q8NGT5 310 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 DIO2Q92813 273 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 EXOSC8Q96B26 276 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 JSRP1Q96MG2 331 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 RILPQ96NA2 401 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 TP63Q9H3D4 680 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 BCAP29Q9UHQ4 241 aa15.33■□□□□ 0.04
PDLIM7-201ENST00000355572 DOCK7Q96N67 2140 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 TRGV5A0A0B4J1U4 118 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 SERTM1A2A2V5 107 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 FAM90A27PA6NNH2 459 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 ENO1P06733 434 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 GLI4P10075 376 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 CSNK2A2P19784 350 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 CRHR1P34998 444 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 CASP3P42574 277 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 MAN2A2P49641 1150 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 DCST1Q5T197 706 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 CLEC6AQ6EIG7 209 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 NPSR1Q6W5P4 371 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 OR7G1Q8NGA0 311 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 DOHHQ9BU89 302 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 ANGPTL4Q9BY76 406 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 UBQLN3Q9H347 655 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 RRAGDQ9NQL2 400 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 OXSMQ9NWU1 459 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 CNIH4Q9P003 139 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 POLR3HQ9Y535 204 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 ABCA12Q86UK0 2595 aa15.32■□□□□ 0.04
PDLIM7-201ENST00000355572 LRBAP50851 2863 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 DCHS2Q6V1P9 2916 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 SUSD5O60279 629 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 UGT2B11O75310 529 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 CREB1P16220 341 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 KRT15P19012 456 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 KRT4P19013 534 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 CORO7P57737 925 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 ACSM2AQ08AH3 577 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 CEBPEQ15744 281 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 HLA-DQA1Q5Y7H0 255 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 ACSM2BQ68CK6 577 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 GALNT18Q6P9A2 607 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms