RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PTGFRNQ9P2B2 879 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 BCKDKO14874 412 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 ETS2P15036 469 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 CTSKP43235 329 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 GABRA4P48169 554 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 NDUFA9Q16795 377 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 HMGN2P46Q86SG4 172 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 OR10G2Q8NGC3 310 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 VANGL1Q8TAA9 524 aaPredicted RBP24.08■■□□□ 1.45
CLK2-201ENST00000355560 BTBD2Q9BX70 525 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 EPHA6Q9UF33 1036 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 PLCL2Q9UPR0 1127 aa24.08■■□□□ 1.45
CLK2-201ENST00000355560 CABIN1Q9Y6J0 2220 aa24.08■■□□□ 1.44
CLK2-201ENST00000355560 CHST10O43529 356 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 NUDT21O43809 227 aaKnown RBP24.07■■□□□ 1.44
CLK2-201ENST00000355560 PABPC4LP0CB38 370 aaKnown RBP24.07■■□□□ 1.44
CLK2-201ENST00000355560 SOX18P35713 384 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 NR1H2P55055 460 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 ZXDAP98168 799 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 SRSF5Q13243 272 aaKnown RBP24.07■■□□□ 1.44
CLK2-201ENST00000355560 TRMT12Q53H54 448 aaKnown RBP24.07■■□□□ 1.44
CLK2-201ENST00000355560 SLC35F3Q8IY50 421 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 ADAMTS15Q8TE58 950 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 SPATA5L1Q9BVQ7 753 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 PDE7BQ9NP56 450 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 ACER3Q9NUN7 267 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 RHCGQ9UBD6 479 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 CSNK1G3Q9Y6M4 447 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 CACNA1EQ15878 2313 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 A0A0G2JPF8 293 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 TRIM64A6NGJ6 449 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 HNRNPCL2B2RXH8 293 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 HNRNPCL3B7ZW38 293 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 GADD45GO95257 159 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 HNRNPCL4P0DMR1 293 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 OR1D5P58170 312 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 SKP1P63208 163 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 NADK2Q4G0N4 442 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 ATAD3BQ5T9A4 648 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 ZNF691Q5VV52 312 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 C16orf62Q7Z3J2 963 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 SLC16A11Q8NCK7 471 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 DOK4Q8TEW6 326 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 FEVQ99581 238 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 ELF4Q99607 663 aaPredicted RBP24.07■■□□□ 1.44
CLK2-201ENST00000355560 RBCK1Q9BYM8 510 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 HCN3Q9P1Z3 774 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 LIPT1Q9Y234 373 aa24.07■■□□□ 1.44
CLK2-201ENST00000355560 MUC3AQ02505 3323 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 FOXS1O43638 330 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 UGT2B11O75310 529 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 ZBTB11O95625 1053 aaPredicted RBP24.06■■□□□ 1.44
CLK2-201ENST00000355560 NT5EP21589 574 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 FUT4P22083 530 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 ARRB1P49407 418 aaPredicted RBP24.06■■□□□ 1.44
CLK2-201ENST00000355560 TUBA4AP68366 448 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 MICAQ29983 383 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 PRAMEF8Q5VWM4 474 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 PRAMEF7Q5VXH5 474 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 CDC73Q6P1J9 531 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 PHF10Q8WUB8 498 aaKnown RBP24.06■■□□□ 1.44
CLK2-201ENST00000355560 ZNF285Q96NJ3 590 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 CD180Q99467 661 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 QRSL1Q9H0R6 528 aaKnown RBP24.06■■□□□ 1.44
CLK2-201ENST00000355560 KCND3Q9UK17 655 aa24.06■■□□□ 1.44
CLK2-201ENST00000355560 DUXAA6NLW8 204 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 GIMD1P0DJR0 217 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 IL18R1Q13478 541 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 FAM214AQ32MH5 1076 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 DEF8Q6ZN54 512 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 COMTD1Q86VU5 262 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 SLC5A8Q8N695 610 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 OR4D11Q8NGI4 311 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 SLC9A6Q92581 669 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 WFDC6Q9BQY6 131 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 YTHDF1Q9BYJ9 559 aaKnown RBP24.05■■□□□ 1.44
CLK2-201ENST00000355560 CXorf56Q9H5V9 222 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 GIN1Q9NXP7 522 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 IGHV1OR21-1A0A087WYE8 117 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 FFAR1O14842 300 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 SEMA7AO75326 666 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 GNSP15586 552 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 IL7RP16871 459 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 LIMS1P48059 325 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 RAPSNQ13702 412 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 RBM45Q8IUH3 476 aaKnown RBP24.05■■□□□ 1.44
CLK2-201ENST00000355560 ANKRD9Q96BM1 317 aaPredicted RBP24.05■■□□□ 1.44
CLK2-201ENST00000355560 SLC35A4Q96G79 324 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 TRNT1Q96Q11 434 aaKnown RBP24.05■■□□□ 1.44
CLK2-201ENST00000355560 SLC38A1Q9H2H9 487 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 RLIMQ9NVW2 624 aa24.05■■□□□ 1.44
CLK2-201ENST00000355560 C19orf53Q9UNZ5 99 aaPredicted RBP24.05■■□□□ 1.44
CLK2-201ENST00000355560 A0A087WXM4 84 aa24.04■■□□□ 1.44
CLK2-201ENST00000355560 HYKKA2RU49 373 aa24.04■■□□□ 1.44
CLK2-201ENST00000355560 GLB1P16278 677 aa24.04■■□□□ 1.44
CLK2-201ENST00000355560 CLK3P49761 638 aaKnown RBP24.04■■□□□ 1.44
CLK2-201ENST00000355560 HMGA2P52926 109 aa24.04■■□□□ 1.44
CLK2-201ENST00000355560 BNC1Q01954 994 aa24.04■■□□□ 1.44
CLK2-201ENST00000355560 CD47Q08722 323 aa24.04■■□□□ 1.44
CLK2-201ENST00000355560 FOXD4Q12950 439 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms