RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 TM4SF18Q96CE8 201 aa20.12■□□□□ 0.81
PTPN18-202ENST00000347849 CXorf40BQ96DE9 158 aa20.12■□□□□ 0.81
PTPN18-202ENST00000347849 SCARF2Q96GP6 870 aaPredicted RBP20.12■□□□□ 0.81
PTPN18-202ENST00000347849 ST6GAL2Q96JF0 529 aa20.12■□□□□ 0.81
PTPN18-202ENST00000347849 SNX18Q96RF0 628 aa20.12■□□□□ 0.81
PTPN18-202ENST00000347849 C1QTNF7Q9BXJ2 289 aa20.12■□□□□ 0.81
PTPN18-202ENST00000347849 SNX11Q9Y5W9 270 aa20.12■□□□□ 0.81
PTPN18-202ENST00000347849 ACADMP11310 421 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 DRD1P21728 446 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 AZGP1P25311 298 aaKnown RBP20.11■□□□□ 0.81
PTPN18-202ENST00000347849 BAK1Q16611 211 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 SLC5A12Q1EHB4 618 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 ASCC1Q8N9N2 400 aaKnown RBP20.11■□□□□ 0.81
PTPN18-202ENST00000347849 GOT1L1Q8NHS2 421 aaPredicted RBP20.11■□□□□ 0.81
PTPN18-202ENST00000347849 GPR151Q8TDV0 419 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 TMCO6Q96DC7 493 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 KLHL31Q9H511 634 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 SMURF1Q9HCE7 757 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 SLC6A20Q9NP91 592 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 COL4A2P08572 1712 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 C4orf51C9J302 202 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 TFECO14948 347 aaPredicted RBP20.11■□□□□ 0.81
PTPN18-202ENST00000347849 NDUFB5O43674 189 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 RFX2P48378 723 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 RAB43Q86YS6 212 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.11■□□□□ 0.81
PTPN18-202ENST00000347849 NFKBIDQ8NI38 313 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 PCBD2Q9H0N5 130 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 MIEF1Q9NQG6 463 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 ACER3Q9NUN7 267 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 TEX10Q9NXF1 929 aaPredicted RBP20.11■□□□□ 0.81
PTPN18-202ENST00000347849 RHCGQ9UBD6 479 aa20.11■□□□□ 0.81
PTPN18-202ENST00000347849 ZNF282Q9UDV7 671 aaPredicted RBP20.11■□□□□ 0.81
PTPN18-202ENST00000347849 A0A075B6Q4 140 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TCRBV21S2A2A0A5A6 115 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 PRICKLE3O43900 615 aaPredicted RBP20.1■□□□□ 0.81
PTPN18-202ENST00000347849 CKMT1AP12532 417 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 IGFBP4P22692 258 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 ALDH9A1P49189 494 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 MAPK12P53778 367 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TEKQ02763 1124 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TOR1AIP1Q5JTV8 583 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 PLAG1Q6DJT9 500 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 OR2L8Q8NGY9 312 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 CREB3L4Q8TEY5 395 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 DEPDC7Q96QD5 511 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TEFMQ96QE5 360 aaKnown RBP20.1■□□□□ 0.81
PTPN18-202ENST00000347849 OR2M4Q96R27 311 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 IL4I1Q96RQ9 567 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 BARHL1Q9BZE3 327 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 CLN6Q9NWW5 311 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TRAPPC4Q9Y296 219 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 NCKAP1Q9Y2A7 1128 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 MAP4K5Q9Y4K4 846 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 A0A1W2PRB8 838 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 CNR2P34972 360 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 BCL6P41182 706 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 SOX3P41225 446 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 PRIM2P49643 509 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 SCARB2Q14108 478 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 RNF130Q86XS8 419 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TMEM145Q8NBT3 493 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 NECTIN4Q96NY8 510 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TTYH2Q9BSA4 534 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TMEM168Q9H0V1 697 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 TTYH1Q9H313 450 aaPredicted RBP20.1■□□□□ 0.81
PTPN18-202ENST00000347849 C3orf14Q9HBI5 128 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 MAPRE3Q9UPY8 281 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 HCN4Q9Y3Q4 1203 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 GRIP1Q9Y3R0 1128 aa20.1■□□□□ 0.81
PTPN18-202ENST00000347849 MYO10Q9HD67 2058 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 AGRPO00253 132 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 SNRNP200O75643 2136 aaKnown RBP20.09■□□□□ 0.81
PTPN18-202ENST00000347849 CCNB2O95067 398 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 GASTP01350 101 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 GABRG2P18507 467 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 TGM4P49221 684 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 TAB1Q15750 504 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 USP30Q70CQ3 517 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 AQP11Q8NBQ7 271 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 OPALINQ96PE5 141 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 PHOX2BQ99453 314 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 CXorf36Q9H7Y0 433 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 FBRSQ9HAH7 460 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 TIGARQ9NQ88 270 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 SNTG1Q9NSN8 517 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 CENPBD1B2RD01 187 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 TNFRSF21O75509 655 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 UGT2B17O75795 530 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 MRPS21P82921 87 aaKnown RBP20.09■□□□□ 0.81
PTPN18-202ENST00000347849 CDK10Q15131 360 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 TBRG1Q3YBR2 411 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 Q6ZS52 159 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 GALNT12Q8IXK2 581 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 HMGB4Q8WW32 186 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 ASB15Q8WXK1 588 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 C17orf62Q9BQA9 187 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 TMEM246Q9BRR3 403 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 TAPBPLQ9BX59 468 aa20.09■□□□□ 0.81
PTPN18-202ENST00000347849 PCDHGB2Q9Y5G2 931 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms