RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 KIAA1143Q96AT1 154 aaPredicted RBP6.02□□□□□ -1.45
ZNF28-201ENST00000339844 MTFMTQ96DP5 389 aaKnown RBP6.02□□□□□ -1.45
ZNF28-201ENST00000339844 APIPQ96GX9 242 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 APOLD1Q96LR9 279 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 TSSK3Q96PN8 268 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 MCCC1Q96RQ3 725 aaPredicted RBP6.02□□□□□ -1.45
ZNF28-201ENST00000339844 MYOCQ99972 504 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 FZD3Q9NPG1 666 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 PCDH12Q9NPG4 1184 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 ABCB10Q9NRK6 738 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 ZNF226Q9NYT6 803 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 NDUFAF4Q9P032 175 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 SPATA7Q9P0W8 599 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 STUB1Q9UNE7 303 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 TRPM6Q9BX84 2022 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 PCDH15Q96QU1 1955 aa6.02□□□□□ -1.45
ZNF28-201ENST00000339844 DCHS1Q96JQ0 3298 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CNOT1A5YKK6 2376 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 SPTBN2O15020 2390 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 PLXNA2O75051 1894 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 ZNF106Q9H2Y7 1883 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 ASCC3Q8N3C0 2202 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 A0A1W2PR77 199 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 IRGMA1A4Y4 181 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 MGAT4DA6NG13 374 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 IGLON5A6NGN9 336 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 GABRR3A8MPY1 467 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 FADS2P1A8MWK0 482 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 A8MX80 341 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 H0Y8X5 98 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CDX4O14627 284 aaPredicted RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 TBX1O43435 398 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 TSPAN6O43657 245 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 PSIP1O75475 530 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 KCNK2O95069 426 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CPSF4O95639 269 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 PAK4O96013 591 aaPredicted RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 SCG5P05408 212 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 ALPIP09923 528 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 DBTP11182 482 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CYP2A6P11509 494 aaPredicted RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CKMT1AP12532 417 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 ATP1B2P14415 290 aaPredicted RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 ZNF24P17028 368 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CBLP22681 906 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 NR4A1P22736 598 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 LHCGRP22888 699 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 GADD45AP24522 165 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 TACR1P25103 407 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 RRM2P31350 389 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CCR7P32248 378 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CSTF2P33240 577 aaKnown RBP eCLIP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 DDOSTP39656 456 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 MMP12P39900 470 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 GSTM5P46439 218 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 RORCP51449 518 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CRISP1P54107 249 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CLDN2P57739 230 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 DCDC1P59894 354 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 PFN3P60673 137 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 LSM3P62310 102 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 ALDH6A1Q02252 535 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 ST3GAL4Q11206 333 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 PPP1R8Q12972 351 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 DGCR6Q14129 220 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CLPPQ16740 277 aaPredicted RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 TMEM52BQ4KMG9 183 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CATSPEREQ5SY80 951 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 PLAG1Q6DJT9 500 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 FRMPD2BQ6IN97 320 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 KIAA1161Q6NSJ0 714 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 SLC23A3Q6PIS1 610 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 BRAT1Q6PJG6 821 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 XKRXQ6PP77 449 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 METAP1DQ6UB28 335 aaPredicted RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CRTC1Q6UUV9 634 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CD300LDQ6UXZ3 194 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 USP45Q70EL2 814 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 AHSA2Q719I0 299 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 HEATR4Q86WZ0 1026 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CCDC71Q8IV32 467 aaPredicted RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 C10orf111Q8N326 155 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 CLDN19Q8N6F1 224 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 GDPD1Q8N9F7 314 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 TMEM145Q8NBT3 493 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 FAM46DQ8NEK8 389 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 PROKR2Q8NFJ6 384 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 OR9Q1Q8NGQ5 310 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 LKAAEAR1Q8TD35 194 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 GEMIN6Q8WXD5 167 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 TRIM63Q969Q1 353 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 UBE2E3Q969T4 207 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 RAB7BQ96AH8 199 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 WDR34Q96EX3 536 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 TEFMQ96QE5 360 aaKnown RBP6.01□□□□□ -1.45
ZNF28-201ENST00000339844 HBEGFQ99075 208 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 FEVQ99581 238 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 MGLLQ99685 303 aa6.01□□□□□ -1.45
ZNF28-201ENST00000339844 BARD1Q99728 777 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms