RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 GATBO75879 557 aaKnown RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SCO1O75880 301 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 RCBTB2O95199 551 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3HP0C7X1 549 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 PIM1P11309 404 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 IDSP22304 550 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 GRPRP30550 384 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 CCR7P32248 378 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 NKG7Q16617 165 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3GQ6DHY5 549 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3CQ6IPX1 549 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3Q8IZP1 549 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 LCN9Q8WX39 176 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 RC3H2Q9HBD1 1191 aaKnown RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 BTNL2Q9UIR0 455 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 XKRYO14609 159 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 ACADLP28330 430 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 PCGF2P35227 344 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 NPAS4Q8IUM7 802 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 OR5D16Q8NGK9 328 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 SORCS1Q8WY21 1168 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 C11orf84Q9BUA3 381 aaPredicted RBP13.36□□□□□ -0.27
EPHB3-201ENST00000330394 SLC12A9Q9BXP2 914 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 HOXD1Q9GZZ0 328 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 MTG2Q9H4K7 406 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 TMEM185BQ9H7F4 350 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 MRPS30Q9NP92 439 aaKnown RBP13.36□□□□□ -0.27
EPHB3-201ENST00000330394 A0A0X1KG70 313 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 NPIPB15A6NHN6 443 aaPredicted RBP13.36□□□□□ -0.27
EPHB3-201ENST00000330394 PDCD5O14737 125 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 ALX3O95076 343 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 PAHP00439 452 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 ADH1AP07327 375 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 PGFP49763 221 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 CTBP2P56545 445 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 GALEQ14376 348 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 KDM4DQ6B0I6 523 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 OR4F15Q8NGB8 312 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 TRMT10AQ8TBZ6 339 aaKnown RBP13.36□□□□□ -0.27
EPHB3-201ENST00000330394 C16orf78Q8WTQ4 265 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 COMMD4Q9H0A8 199 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 KLK4Q9Y5K2 254 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 DUXAA6NLW8 204 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 CACNB4O00305 520 aaPredicted RBP13.36□□□□□ -0.27
EPHB3-201ENST00000330394 PRNPP04156 253 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 SLC35G6P0C7Q6 338 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 ACADMP11310 421 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 MAGEA11P43364 429 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 LMAN2Q12907 356 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 HYAL4Q2M3T9 481 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 SBSNQ6UWP8 590 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 KCTD9Q7L273 389 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.36□□□□□ -0.27
EPHB3-201ENST00000330394 GNPDA2Q8TDQ7 276 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 OR5P2Q8WZ92 322 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 ZIC5Q96T25 663 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 BCL2L14Q9BZR8 327 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 PCDHGA6Q9Y5G7 932 aa13.36□□□□□ -0.27
EPHB3-201ENST00000330394 TNFRSF10BO14763 440 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 SPDEFO95238 335 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 SELPP16109 830 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 BTN3A2P78410 334 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 SP140Q13342 867 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 FCRLBQ6BAA4 426 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 NRMQ8IXM6 262 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 SLC44A3Q8N4M1 653 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 NXPE2Q96DL1 559 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 GPER1Q99527 375 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 RDH14Q9HBH5 336 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 PHPT1Q9NRX4 125 aaPredicted RBP13.35□□□□□ -0.27
EPHB3-201ENST00000330394 LRP5O75197 1615 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 ECM29Q5VYK3 1845 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 TRBV4-1A0A0J9YWV2 114 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF840PA6NDX5 716 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 C8AP07357 584 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
EPHB3-201ENST00000330394 GNSP15586 552 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 HTR3AP46098 478 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 DNASE1L1P49184 302 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 OC90Q02509 493 aaPredicted RBP13.35□□□□□ -0.27
EPHB3-201ENST00000330394 SF3A2Q15428 464 aaKnown RBP13.35□□□□□ -0.27
EPHB3-201ENST00000330394 XKR7Q5GH72 579 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 CDKL4Q5MAI5 379 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 TMEM69Q5SWH9 247 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 CHCHD4Q8N4Q1 142 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 ECHDC3Q96DC8 303 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 C7orf34Q96L11 122 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 ADAD1Q96M93 576 aaKnown RBP13.35□□□□□ -0.27
EPHB3-201ENST00000330394 LGR4Q9BXB1 951 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 TMEM45AQ9NWC5 275 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 TEX10Q9NXF1 929 aaPredicted RBP13.35□□□□□ -0.27
EPHB3-201ENST00000330394 RASD1Q9Y272 281 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 VIPR1P32241 457 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 GDI2P50395 445 aaKnown RBP13.35□□□□□ -0.27
EPHB3-201ENST00000330394 GRB14Q14449 540 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 FCN2Q15485 313 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 ZMAT1Q5H9K5 638 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 CRTC1Q6UUV9 634 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 PROKR2Q8NFJ6 384 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms