RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 KRT6AP02538 564 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 KRT6BP04259 564 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 HPNP05981 417 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 CSNK2A2P19784 350 aaPredicted RBP12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 IMPDH1P20839 514 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 NT5EP21589 574 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 ATP5F1P24539 256 aaPredicted RBP12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 ABCD3P28288 659 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 SOX18P35713 384 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 KRT6CP48668 564 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 DCAF7P61962 342 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 SLC25A35Q3KQZ1 300 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 UNC50Q53HI1 259 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 NHSL2Q5HYW2 709 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 RPS27LQ71UM5 84 aaKnown RBP12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 CCDC71Q8IV32 467 aaPredicted RBP12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 SLC22A9Q8IVM8 553 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 GBP7Q8N8V2 638 aaPredicted RBP12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 KIF18AQ8NI77 898 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 UHMK1Q8TAS1 419 aaKnown RBP12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 ZNF675Q8TD23 568 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 ERP27Q96DN0 273 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 L3HYPDHQ96EM0 354 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 HSPBAP1Q96EW2 488 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 TMEM237Q96Q45 408 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 TXLNGYQ9BZA5 131 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 SHCBP1LQ9BZQ2 653 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 EXO5Q9H790 373 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 SIRT5Q9NXA8 310 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 TMEM216Q9P0N5 145 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 KCNN3Q9UGI6 736 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 NFU1Q9UMS0 254 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 MED13LQ71F56 2210 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 A0A0G2JNJ9 132 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 NKX2-6A6NCS4 301 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 FAM90A27PA6NNH2 459 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 AHRRA9YTQ3 701 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 MANBAO00462 879 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 TO15178 435 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 DLX3O60479 287 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 BCAS2O75934 225 aaPredicted RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 SUPT7LO94864 414 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 ENO1P06733 434 aaKnown RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 RHOXF2BP0C7M4 288 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 DRD2P14416 443 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 GDF1P27539 372 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 DEKP35659 375 aaKnown RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 PEX19P40855 299 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 CASP3P42574 277 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 GSTM5P46439 218 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 PRKAA2P54646 552 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 FBXW4P57775 412 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 NAA20P61599 178 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 PSPHP78330 225 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 TLE4Q04727 773 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 CRYZQ08257 329 aaKnown RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 SNTA1Q13424 505 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 CEBPEQ15744 281 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 FNDC7Q5VTL7 733 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 PACS2Q86VP3 889 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 ULK2Q8IYT8 1036 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 SAMD14Q8IZD0 417 aaPredicted RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 CLYBLQ8N0X4 340 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 LIX1Q8N485 282 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 C1orf52Q8N6N3 182 aaKnown RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 MZB1Q8WU39 189 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 C11orf24Q96F05 449 aaPredicted RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 CNRIP1Q96F85 164 aaPredicted RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 ZNF681Q96N22 645 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 RILPQ96NA2 401 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 UCK2Q9BZX2 261 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 PRDM14Q9GZV8 571 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 NXF5Q9H1B4 397 aaKnown RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 PSMC3IPQ9P2W1 217 aaPredicted RBP12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 Q9UFV3 132 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 DTX4Q9Y2E6 619 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 CELSR1Q9NYQ6 3014 aa12.44□□□□□ -0.42
GTF3C6-201ENST00000329970 MED12Q93074 2177 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 H3BQF6 201 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 ULK1O75385 1050 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 ERAL1O75616 437 aaKnown RBP12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 PPM1BO75688 479 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 EPPINO95925 133 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 CBX7O95931 251 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 ABCB1P08183 1280 aaPredicted RBP12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 TSPAN8P19075 237 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 CDK9P50750 372 aaKnown RBP12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 PKNOX1P55347 436 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 LCP2Q13094 533 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 DUSP8Q13202 625 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 SF3B4Q15427 424 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■□□□ 12.8
GTF3C6-201ENST00000329970 SPIN4Q56A73 249 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 SGO1Q5FBB7 561 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 SLC30A6Q6NXT4 461 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 GALNT18Q6P9A2 607 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 GPRIN3Q6ZVF9 776 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 NUP54Q7Z3B4 507 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 PM20D2Q8IYS1 436 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 CDYL2Q8N8U2 506 aa12.43□□□□□ -0.42
GTF3C6-201ENST00000329970 EIF1ADQ8N9N8 165 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms