RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CDH24Q86UP0 819 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 IQCHQ86VS3 1027 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 C2orf15Q8WU43 125 aaKnown RBP16.92■□□□□ 0.3
PRKCB-202ENST00000321728 UCN3Q969E3 161 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 TMEM159Q96B96 161 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 ARHGAP9Q9BRR9 750 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 RANBP3Q9H6Z4 567 aaPredicted RBP16.92■□□□□ 0.3
PRKCB-202ENST00000321728 NT5DC2Q9H857 520 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 MYNNQ9NPC7 610 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 ZNF224Q9NZL3 707 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 CD8B2A6NJW9 211 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 SLCO2B1O94956 709 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 RAF1P04049 648 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 CD8BP10966 210 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 HMGA1P17096 107 aaKnown RBP16.91■□□□□ 0.3
PRKCB-202ENST00000321728 ELK1P19419 428 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 SLC6A1P30531 599 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 OR1D2P34982 312 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 GAS1P54826 345 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 BTG1P62324 171 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 CAP1Q01518 475 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.31e-9■■■□□ 16.9
PRKCB-202ENST00000321728 ZNF354BQ96LW1 612 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 ABCG5Q9H222 651 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 SPNS1Q9H2V7 528 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 POLHQ9Y253 713 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 TET1Q8NFU7 2136 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 SNTNA6NMZ2 147 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 PRRG1O14668 218 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 PRODHO43272 600 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 DHFRP00374 187 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 LIMS3P0CW19 117 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 LIMS4P0CW20 117 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 STOMP27105 288 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 SMSP52788 366 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 FGFBP1Q14512 234 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 SLC25A30Q5SVS4 291 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 CD200R1LQ6Q8B3 271 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 COMMD7Q86VX2 200 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 ZNF655Q8N720 491 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-202ENST00000321728 OR4K5Q8NGD3 323 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 OR6C4Q8NGE1 309 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 OVCA2Q8WZ82 227 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 FNDC11Q9BVV2 318 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 SORBS1Q9BX66 1292 aaKnown RBP16.91■□□□□ 0.3
PRKCB-202ENST00000321728 C1QTNF7Q9BXJ2 289 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 SUV39H2Q9H5I1 410 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 FGF20Q9NP95 211 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-202ENST00000321728 C12orf4Q9NQ89 552 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 CTPS2Q9NRF8 586 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 TAAR2Q9P1P5 351 aa16.91■□□□□ 0.3
PRKCB-202ENST00000321728 EXOSC1Q9Y3B2 195 aaKnown RBP16.91■□□□□ 0.3
PRKCB-202ENST00000321728 M0R3H8 397 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 GABRPO00591 440 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 LANCL1O43813 399 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 HLA-DPB1P04440 258 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 HK1P19367 917 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 RIN1Q13671 783 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 FAAH2Q6GMR7 532 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 SLC36A4Q6YBV0 504 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 OR11H7Q8NGC8 314 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 OR56A3Q8NH54 315 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 RAET1EQ8TD07 263 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 DPCDQ9BVM2 203 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-202ENST00000321728 ZDHHC6Q9H6R6 413 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 ZFP64Q9NPA5 681 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 ISYNA1Q9NPH2 558 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 DMRT3Q9NQL9 472 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 MRPL39Q9NYK5 338 aaKnown RBP16.9■□□□□ 0.3
PRKCB-202ENST00000321728 B4GALT6Q9UBX8 382 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 CLEC4EQ9ULY5 219 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 SH2B3Q9UQQ2 575 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 IRGMA1A4Y4 181 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 ANHXE9PGG2 379 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 SLC19A2O60779 497 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 PRKCZQ05513 592 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 COX10Q12887 443 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 RPA4Q13156 261 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 DUSP6Q16828 381 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 SPDYE7PQ495Y7 208 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 IDNKQ5T6J7 187 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 TMEM107Q6UX40 140 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 KRT74Q7RTS7 529 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 OR11H4Q8NGC9 324 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 GPA33Q99795 319 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 PLA2G12AQ9BZM1 189 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 RNF32Q9H0A6 362 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 EGLN3Q9H6Z9 239 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 NUDT15Q9NV35 164 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 DOCK6Q96HP0 2047 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 C5orf42Q9H799 3197 aa16.9■□□□□ 0.3
PRKCB-202ENST00000321728 KIAA1671Q9BY89 1806 aa16.89■□□□□ 0.29
PRKCB-202ENST00000321728 TSPAN6O43657 245 aa16.89■□□□□ 0.29
PRKCB-202ENST00000321728 TSPAN9O75954 239 aa16.89■□□□□ 0.29
PRKCB-202ENST00000321728 KLHL18O94889 574 aa16.89■□□□□ 0.29
PRKCB-202ENST00000321728 TPOP07202 933 aa16.89■□□□□ 0.29
PRKCB-202ENST00000321728 ATF4P18848 351 aaPredicted RBP16.89■□□□□ 0.29
PRKCB-202ENST00000321728 KCNJ5P48544 419 aa16.89■□□□□ 0.29
PRKCB-202ENST00000321728 RAB8AP61006 207 aa16.89■□□□□ 0.29
PRKCB-202ENST00000321728 SNRPD1P62314 119 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms