RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PCOLCE2Q9UKZ9 415 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 TBC1D24Q9ULP9 559 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 V9GYQ6 96 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 MDC1Q14676 2089 aaKnown RBP12.35□□□□□ -0.43
CPNE1-201ENST00000317677 CACNA1HO95180 2353 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 OR5K4A6NMS3 321 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 FAM220BPB1ANY3 271 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 CHURC1-FNTBB4DL54 471 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 AP3D1O14617 1153 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 TNFRSF10CO14798 259 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 PPM1DO15297 605 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 TRIM3O75382 744 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-201ENST00000317677 RASGRP1O95267 797 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 CPSF4O95639 269 aaKnown RBP12.34□□□□□ -0.43
CPNE1-201ENST00000317677 MT-ND1P03886 318 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 ANXA6P08133 673 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 FURINP09958 794 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 PSKH1P11801 424 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 CD36P16671 472 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 MAGP20916 626 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 PTX3P26022 381 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-201ENST00000317677 AKT2P31751 481 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 UQCRC1P31930 480 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 DGKEP52429 567 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 KCNAB2Q13303 367 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 GAB1Q13480 694 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 STK11Q15831 433 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 KHDRBS2Q5VWX1 349 aaKnown RBP12.34□□□□□ -0.43
CPNE1-201ENST00000317677 KIAA0895LQ68EN5 471 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 WASH2PQ6VEQ5 465 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 UBE3DQ7Z6J8 389 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 SFTPA2Q8IWL1 248 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 MICU2Q8IYU8 434 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 TMEM132CQ8N3T6 1108 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 DEDD2Q8WXF8 326 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 FCGR1BQ92637 280 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 NSMCE2Q96MF7 247 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 RNF145Q96MT1 663 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 REEP4Q9H6H4 257 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 PRM3Q9NNZ6 103 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 POLMQ9NP87 494 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-201ENST00000317677 WSB2Q9NYS7 404 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-201ENST00000317677 C3orf18Q9UK00 162 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 INVSQ9Y283 1065 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 LYVE1Q9Y5Y7 322 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 HS3ST3A1Q9Y663 406 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 TRBV23OR9-2A0A075B6M9 112 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 C1orf226A1L170 272 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 OR2A25A4D2G3 310 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 C4orf51C9J302 202 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 MEN1O00255 615 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 MAN2B1O00754 1011 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 ALPPP05187 535 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 CELA2BP08218 269 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-201ENST00000317677 ICAM2P13598 275 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 FOSL1P15407 271 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 PSMB9P28065 219 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 HLA-DMAP28067 261 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 BSGP35613 385 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 PIGAP37287 484 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 SLC19A1P41440 591 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 ACTR1BP42025 376 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 MAPK12P53778 367 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 TAS2R50P59544 299 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 ACTR1AP61163 376 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 YPEL5P62699 121 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 SPANXN2Q5MJ10 180 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 CPTPQ5TA50 214 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 ZNF852Q6ZMS4 543 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 NRARPQ7Z6K4 114 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 AMER3Q8N944 861 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 SETD9Q8NE22 299 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 CREB3L4Q8TEY5 395 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 RLN3Q8WXF3 142 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 SHDQ96IW2 340 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 PANX1Q96RD7 426 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 C6orf62Q9GZU0 229 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-201ENST00000317677 TWSG1Q9GZX9 223 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 GORASP2Q9H8Y8 452 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 GPR27Q9NS67 375 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 SCN3BQ9NY72 215 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 DNAJB9Q9UBS3 223 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 BTNL2Q9UIR0 455 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 KLHL20Q9Y2M5 609 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 PCDHB11Q9Y5F2 797 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 CSNK1G3Q9Y6M4 447 aa12.34□□□□□ -0.43
CPNE1-201ENST00000317677 ELOVL7A1L3X0 281 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 ANKDD1BA6NHY2 528 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 DSCR3O14972 297 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 OR1F1O43749 312 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 CPNE3O75131 537 aaKnown RBP12.33□□□□□ -0.44
CPNE1-201ENST00000317677 ANGPTL1O95841 491 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 STATHP02808 62 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 IL3P08700 152 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 ITGAMP11215 1152 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 ENGP17813 658 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 BCL6P41182 706 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 MAP2K4P45985 399 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 RFX2P48378 723 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 MASP1P48740 699 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms