RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZFP64Q9NPA5 681 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 CNOT11Q9UKZ1 510 aaKnown RBP24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 ENTPD4Q9Y227 616 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 ANKRD33BA6NCL7 494 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 TRIM13O60858 407 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 BCAS2O75934 225 aaPredicted RBP24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 RSL1D1O76021 490 aaKnown RBP24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 IGHG3P01860 377 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 DUSP2Q05923 314 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 PCLAFQ15004 111 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 FAM180BQ6P0A1 224 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 SRRM1Q8IYB3 904 aaKnown RBP24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 ZNF675Q8TD23 568 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 EXOSC8Q96B26 276 aaKnown RBP24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 ERP27Q96DN0 273 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 DOHHQ9BU89 302 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 PRODH2Q9UF12 536 aa24.32■■□□□ 1.48
CDKN2A-201ENST00000304494 MYO7BQ6PIF6 2116 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 OR14I1A6ND48 311 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 FBXW4P57775 412 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 DCAF7P61962 342 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 SLC10A1Q14973 349 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 EXOSC7Q15024 291 aaKnown RBP24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 LTB4RQ15722 352 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 TMEM64Q6YI46 380 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 C3P1Q6ZMU1 363 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 CCDC116Q8IYX3 515 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 DIO2Q92813 273 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 METTL2AQ96IZ6 378 aaKnown RBP24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 DMRTA2Q96SC8 542 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 TP63Q9H3D4 680 aaPredicted RBP24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 SLC35C2Q9NQQ7 365 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 B4GALT7Q9UBV7 327 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 WBP11Q9Y2W2 641 aaKnown RBP24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 UNC79Q9P2D8 2635 aa24.31■■□□□ 1.48
CDKN2A-201ENST00000304494 A0A1B0GVC2 190 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 ATP6AP2A0A1C7CYW4 349 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 ADAM10O14672 748 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 ACOX3O15254 700 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 SUSD5O60279 629 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 ATP6AP2O75787 350 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 CBX7O95931 251 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 NAGAP17050 411 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 DDCP20711 480 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 ABCD3P28288 659 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 TRMT12Q53H54 448 aaKnown RBP24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 ZNF628Q5EBL2 1059 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 SP5Q6BEB4 398 aaPredicted RBP24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 OR52R1Q8NGF1 315 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 SPPL2AQ8TCT8 520 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 HSPBAP1Q96EW2 488 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 LCORQ96JN0 433 aaPredicted RBP24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 SMC6Q96SB8 1091 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 ITPAQ9BY32 194 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 NXF5Q9H1B4 397 aaKnown RBP24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 ZNF703Q9H7S9 590 aaPredicted RBP24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 PROK2Q9HC23 129 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 TNFRSF12AQ9NP84 129 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 CHST11Q9NPF2 352 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 DTX4Q9Y2E6 619 aa24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 V9GYY5 206 aaPredicted RBP24.3■■□□□ 1.48
CDKN2A-201ENST00000304494 SLC28A1O00337 649 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 BCKDKO14874 412 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 AZIN1O14977 448 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 CHEK2O96017 543 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 PCSK2P16519 638 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 MPIP34949 423 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 MRPS35P82673 323 aaKnown RBP24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 C2orf80Q0P641 193 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 CEBPEQ15744 281 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 CLEC6AQ6EIG7 209 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 TMEM211Q6ICI0 200 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 TRILQ7L0X0 811 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 CDC26Q8NHZ8 85 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 ZNF597Q96LX8 424 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 JSRP1Q96MG2 331 aaPredicted RBP24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 FAM111AQ96PZ2 611 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 GATA5Q9BWX5 397 aaPredicted RBP24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 LDAHQ9H6V9 325 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 MYNNQ9NPC7 610 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 MIEF1Q9NQG6 463 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 QPCTLQ9NXS2 382 aa24.29■■□□□ 1.48
CDKN2A-201ENST00000304494 NPIPA2E9PIF3 369 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 NPIPA3F8WFD2 350 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 AQP7O14520 342 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 HNRNPRO43390 633 aaKnown RBP24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 RGS14O43566 566 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 HCN1O60741 890 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 SNX4O95219 450 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 DRD5P21918 477 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 PRPH2P23942 346 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 HTR1EP28566 365 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 SOX18P35713 384 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 MAN2A2P49641 1150 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 EMDP50402 254 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 DUSP8Q13202 625 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 ERCC6LQ2NKX8 1250 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 TMEM198Q66K66 360 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 IKBIPQ70UQ0 350 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms