RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TIGD4Q8IY51 512 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 MAL2Q969L2 176 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 NEDD4LQ96PU5 975 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 TSPAN9O75954 239 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ITGB7P26010 798 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 STOMP27105 288 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ERVPABLB-1P60509 514 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 PIGFQ07326 219 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 RPA4Q13156 261 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 RPS26P11Q5JNZ5 115 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-201ENST00000293441 STEAP4Q687X5 459 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF551Q7Z340 670 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-201ENST00000293441 UHRF1Q96T88 793 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-201ENST00000293441 MAP3K3Q99759 626 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 KLF16Q9BXK1 252 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-201ENST00000293441 TRBV2A0A0J9YWF9 115 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 CD8B2A6NJW9 211 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 BRINP1O60477 761 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 CD3GP09693 182 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 CD8BP10966 210 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 GTF2F2P13984 249 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 PSMA6P60900 246 aaKnown RBP16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ACTC1P68032 377 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ACTA1P68133 377 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 CDHR3Q6ZTQ4 885 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 RAB11FIP2Q7L804 512 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 SAMD12Q8N8I0 201 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 NEIL3Q8TAT5 605 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 MUS81Q96NY9 551 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 FIZ1Q96SL8 496 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ACTRT3Q9BYD9 372 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 HHATLQ9HCP6 504 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 E7ESA3 106 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 SFTPDP35247 375 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 CXCL12P48061 93 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 SH3BP2P78314 561 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 KCNAB2Q13303 367 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 UGT8Q16880 541 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 HSD11B1LQ7Z5J1 315 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 KCNN1Q92952 543 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ALOXE3Q9BYJ1 711 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 SCN11AQ9UI33 1791 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 TUBA3EQ6PEY2 450 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF367Q7RTV3 350 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 SLC12A9Q9BXP2 914 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 CITO14578 2027 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 GXYLT2A0PJZ3 443 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 GRXCR2A6NFK2 248 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 LRRN3E7EW58 273 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 GPR37L1O60883 481 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 IL4RP24394 825 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 SOX9P48436 509 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 FGL2Q14314 439 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 LRRN3Q9H3W5 708 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF226Q9NYT6 803 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 FAM189A1O60320 539 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 NDUFV2P19404 249 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 MAOBP27338 520 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 TMEM19Q96HH6 336 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 SLC6A7Q99884 636 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 C2orf42Q9NWW7 574 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 PCTPQ9UKL6 214 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 CCRL2O00421 344 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 ANXA3P12429 323 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 POU3F4P49335 361 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 TMEM236Q5W0B7 351 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 UNQ6126/PRO20091Q6UXV3 157 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 SEC14L4Q9UDX3 406 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 GJE1A6NN92 205 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 SLC6A11P48066 632 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 TM4SF4P48230 202 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF404Q494X3 552 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 ARHGAP11AQ6P4F7 1023 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 TMPRSS12Q86WS5 348 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 A0A1B0GVC2 190 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 FTCDNL1E5RQL4 147 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 DCKP27707 260 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 ARG2P78540 354 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF252P-AS1Q0IIN9 211 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 HORMAD2Q8N7B1 307 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 TRMT10AQ8TBZ6 339 aaKnown RBP16.44■□□□□ 0.22
SHANK1-201ENST00000293441 HOXB13Q92826 284 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-201ENST00000293441 FBXL8Q96CD0 374 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 TMEM185BQ9H7F4 350 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 IL26Q9NPH9 171 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 HEBP1Q9NRV9 189 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 EXTL2Q9UBQ6 330 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 UBR2Q8IWV8 1755 aa16.44■□□□□ 0.22
SHANK1-201ENST00000293441 A0A0J9YY10 115 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 AURKAO14965 403 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 DEFA5Q01523 94 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 RAB12Q6IQ22 244 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 ENPP6Q6UWR7 440 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 KLBQ86Z14 1044 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF584Q8IVC4 421 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 MRPL43Q8N983 215 aaKnown RBP16.43■□□□□ 0.22
SHANK1-201ENST00000293441 IL17RCQ8NAC3 791 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 MINDY2Q8NBR6 621 aa16.43■□□□□ 0.22
SHANK1-201ENST00000293441 PHOSPHO2Q8TCD6 241 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms