RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ANKRD12Q6UB98 2062 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 BMPR1AP36894 532 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 GPR143P51810 404 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 SELENOVP59797 346 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 ZNF791Q3KP31 576 aaPredicted RBP10.92□□□□□ -0.66
USP53-201ENST00000274030 ALG10BQ5I7T1 473 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 SCD5Q86SK9 330 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 NAGSQ8N159 534 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 FIBINQ8TAL6 211 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 ECHDC3Q96DC8 303 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 RNF38Q9H0F5 515 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 EBF1Q9UH73 591 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 CLCA1A8K7I4 914 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 PIGGQ5H8A4 983 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 RANBP10Q6VN20 620 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 NRMQ8IXM6 262 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 TMEM185BQ9H7F4 350 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 RXFP3Q9NSD7 469 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 STARD5Q9NSY2 213 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 ANKMY1Q9P2S6 941 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 A6NCN8 305 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 H3BQ06 376 aaPredicted RBP10.91□□□□□ -0.66
USP53-201ENST00000274030 SLC10A3P09131 477 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 RAB28P51157 221 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 AFF1P51825 1210 aaKnown RBP10.91□□□□□ -0.66
USP53-201ENST00000274030 RPL19P84098 196 aaKnown RBP10.91□□□□□ -0.66
USP53-201ENST00000274030 EIF4HQ15056 248 aaKnown RBP10.91□□□□□ -0.66
USP53-201ENST00000274030 TIGD4Q8IY51 512 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 SLC5A8Q8N695 610 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 FBXO27Q8NI29 283 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 SORBS1Q9BX66 1292 aaKnown RBP10.91□□□□□ -0.66
USP53-201ENST00000274030 FANCFQ9NPI8 374 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 IGSF5Q9NSI5 407 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 GLS2Q9UI32 602 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 GXYLT2A0PJZ3 443 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 NME4O00746 187 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 LAMTOR5O43504 91 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 FRS3O43559 492 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 RAD1O60671 282 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 FMO6PO60774 539 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 SEMA4FO95754 770 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 HRH2P25021 359 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 ATAD3CQ5T2N8 411 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 MYLIPQ8WY64 445 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 TRIB3Q96RU7 358 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 M0R3H8 397 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 SSX5O60225 188 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 RAD51DO75771 328 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 PGCP20142 388 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 CAPN3P20807 821 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 SHISA6Q6ZSJ9 500 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 HS3ST5Q8IZT8 346 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 OR13C3Q8NGS6 347 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 TIMM8BQ9Y5J9 83 aaPredicted RBP10.91□□□□□ -0.66
USP53-201ENST00000274030 hCG_1807616A0A1W2PRN6 198 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 DRD2P14416 443 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 C5AR1P21730 350 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 CLDN2P57739 230 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 AIMP2Q13155 320 aaKnown RBP10.91□□□□□ -0.66
USP53-201ENST00000274030 APOFQ13790 326 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 ZNF423Q2M1K9 1284 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 LEG1Q6P5S2 330 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 ZNF100Q8IYN0 542 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 PRR22Q8IZ63 422 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 ACBD7Q8N6N7 88 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 OR4K5Q8NGD3 323 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 OR9Q2Q8NGE9 314 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 ZDHHC1Q8WTX9 485 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 NELL2Q99435 816 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 G3V2L1 256 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 PPM1BO75688 479 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 ZNF35P13682 527 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 ARSAP15289 507 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 CNR2P34972 360 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 FRKP42685 505 aaPredicted RBP10.91□□□□□ -0.66
USP53-201ENST00000274030 NCS1P62166 190 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 RAB33AQ14088 237 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 GRIN2CQ14957 1233 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 PAGE3Q5JUK9 113 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 C3orf33Q6P1S2 294 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 LARP4Q71RC2 724 aaKnown RBP eCLIP10.91□□□□□ -0.66
USP53-201ENST00000274030 ZER1Q7Z7L7 766 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 CYB561A3Q8NBI2 242 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 TUBA1CQ9BQE3 449 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 SLC7A11Q9UPY5 501 aa10.91□□□□□ -0.66
USP53-201ENST00000274030 MYH10P35580 1976 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 IGKV6D-21A0A0A0MT36 114 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 M0R233 179 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 PCDH17O14917 1159 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 CERS1P27544 350 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 DCKP27707 260 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 CLCN2P51788 898 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 PIN1Q13526 163 aaPredicted RBP10.9□□□□□ -0.66
USP53-201ENST00000274030 UBE2UQ5VVX9 321 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 ASRGL1Q7L266 308 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 ALDH16A1Q8IZ83 802 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 NEDD4LQ96PU5 975 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 SLC19A2O60779 497 aa10.9□□□□□ -0.66
USP53-201ENST00000274030 GGT1P19440 569 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms