RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 HNRNPCL4P0DMR1 293 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 CDH3P22223 829 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 CBLP22681 906 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 ESRRGP62508 458 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 COLEC12Q5KU26 742 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 LAIR1Q6GTX8 287 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 ZNF770Q6IQ21 691 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-201ENST00000269318 KLHL35Q6PF15 583 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 PHF10Q8WUB8 498 aaKnown RBP15.6■□□□□ 0.09
CCDC40-201ENST00000269318 ALPK1Q96QP1 1244 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 CCDC3Q9BQI4 270 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 SPATA5L1Q9BVQ7 753 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 NMNAT1Q9HAN9 279 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-201ENST00000269318 PAK1IP1Q9NWT1 392 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-201ENST00000269318 POFUT2Q9Y2G5 429 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 HCN4Q9Y3Q4 1203 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 KNL1Q8NG31 2342 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 SLC9B1P1A6NJY1 282 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 NME6O75414 186 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-201ENST00000269318 CCNB2O95067 398 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 PORP16435 677 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-201ENST00000269318 JUNBP17275 347 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-201ENST00000269318 BCKDHBP21953 392 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 DEFB110Q30KQ9 67 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 ZNF628Q5EBL2 1059 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 C6orf132Q5T0Z8 1188 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 XAF1Q6GPH4 301 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 MFSD12Q6NUT3 480 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 B3GNT8Q7Z7M8 397 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 COL26A1Q96A83 441 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 MS4A4EQ96PG1 132 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 SLC38A1Q9H2H9 487 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 GIN1Q9NXP7 522 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 PTTG2Q9NZH5 202 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 RSL24D1Q9UHA3 163 aaKnown RBP15.6■□□□□ 0.09
CCDC40-201ENST00000269318 DOLKQ9UPQ8 538 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 LIPT1Q9Y234 373 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 PCDHGA6Q9Y5G7 932 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 LMO7DNF2Z398 122 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 K7ESF4 209 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 AQP9O43315 295 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 FGF17O60258 216 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 ANGPTL1O95841 491 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 PROS1P07225 676 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 PEX19P40855 299 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 CXCR4P61073 352 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 SHC2P98077 582 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 RAB39AQ14964 217 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 MAD2L1BPQ15013 274 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-201ENST00000269318 PRTGQ2VWP7 1150 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 GPAT3Q53EU6 434 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 HEPHL1Q6MZM0 1159 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 MCATQ8IVS2 390 aaKnown RBP15.59■□□□□ 0.09
CCDC40-201ENST00000269318 SPARTQ8N0X7 666 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 DNAJC22Q8N4W6 341 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 SIMC1Q8NDZ2 872 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 VANGL1Q8TAA9 524 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-201ENST00000269318 SLC35A4Q96G79 324 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 TRNT1Q96Q11 434 aaKnown RBP15.59■□□□□ 0.09
CCDC40-201ENST00000269318 DNAAF2Q9NVR5 837 aaKnown RBP15.59■□□□□ 0.09
CCDC40-201ENST00000269318 PTGFRNQ9P2B2 879 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 AASSQ9UDR5 926 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 SPACA6W5XKT8 324 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 GON4LQ3T8J9 2241 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 TMEM131Q92545 1883 aa15.59■□□□□ 0.09
CCDC40-201ENST00000269318 TRBV4-1A0A0J9YWV2 114 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 SGK494L7N484 410 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 LGI1O95970 557 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 ATP1B1P05026 303 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 RGS19P49795 217 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 NUP107P57740 925 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 HNRNPKP61978 463 aaKnown RBP eCLIP15.58■□□□□ 0.09
CCDC40-201ENST00000269318 ID2Q02363 134 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 FHL5Q5TD97 284 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 CDC73Q6P1J9 531 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 OGFOD3Q6PK18 319 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 B3GNT6Q6ZMB0 384 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 Q6ZPB1 254 aaPredicted RBP15.58■□□□□ 0.09
CCDC40-201ENST00000269318 ALDH16A1Q8IZ83 802 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 PARP8Q8N3A8 854 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 BPIFB6Q8NFQ5 453 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 SPACA7Q96KW9 195 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 MAP3K3Q99759 626 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 FUZQ9BT04 418 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.58■□□□□ 0.09
CCDC40-201ENST00000269318 CCDC88CQ9P219 2028 aa15.58■□□□□ 0.09
CCDC40-201ENST00000269318 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 FAM227AF5H4B4 570 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 M0R3H8 397 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 CASC3O15234 703 aaKnown RBP15.58■□□□□ 0.08
CCDC40-201ENST00000269318 AHCYL1O43865 530 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 XPNPEP2O43895 674 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 PCDHGA12O60330 932 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 LDB3O75112 727 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 ZIC2O95409 532 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-201ENST00000269318 GPR75O95800 540 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 SLC5A2P31639 672 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 CHRNEQ04844 493 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 NEDD8Q15843 81 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 SLC36A4Q6YBV0 504 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms