RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 LAMA3Q16787 3333 aa15.34■□□□□ 0.05
PDZRN3-201ENST00000263666 TDRD15B5MCY1 1934 aaKnown RBP15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 MEIOCA2RUB1 952 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 ZNF821O75541 412 aaPredicted RBP15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 TGM1P22735 817 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 MAN2A2P49641 1150 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 NNATQ16517 81 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 NXNL2Q5VZ03 156 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 MZT2AQ6P582 158 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 VITQ6UXI7 678 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 APH1BQ8WW43 257 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 C7orf34Q96L11 122 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 MOV10Q9HCE1 1003 aaKnown RBP15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 PLSCR3Q9NRY6 295 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 MUTYHQ9UIF7 546 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 N6AMT1Q9Y5N5 214 aa15.33■□□□□ 0.05
PDZRN3-201ENST00000263666 SCN4AP35499 1836 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 LOC102723532A0A0G2JNH3 316 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 HYAL3O43820 417 aaPredicted RBP15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 RAB36O95755 333 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 MYOGP15173 224 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 JUNDP17535 347 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 ATAD3CQ5T2N8 411 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 FAM92BQ6ZTR7 304 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 ADGRD2Q7Z7M1 963 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 TRIM43Q96BQ3 446 aaPredicted RBP15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 DAPL1A0PJW8 107 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 HMGN2P05204 90 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 HSD3B1P14060 373 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 GNSP15586 552 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 HSD3B2P26439 372 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 LSM11P83369 360 aaKnown RBP eCLIP15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 KCNC3Q14003 757 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 BTBD16Q32M84 506 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 SLC27A4Q6P1M0 643 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 HTR3DQ70Z44 454 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 LRRTM4Q86VH4 590 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 GALNT13Q8IUC8 556 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 HDDC3Q8N4P3 179 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 MRPL43Q8N983 215 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 FAM98AQ8NCA5 519 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 MCHR1Q99705 422 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 TNFRSF10DQ9UBN6 386 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 TMPRSS11EQ9UL52 423 aa15.33■□□□□ 0.04
PDZRN3-201ENST00000263666 GREB1Q4ZG55 1949 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 TRBV5-4A0A0C4DH59 114 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 H0YIV9 168 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 GFYI3L273 518 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 PGRMC2O15173 223 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 KMOO15229 486 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 ABLIM3O94929 683 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 CCR2P41597 374 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 SLC6A11P48066 632 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 E2F2Q14209 437 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 TOR1AIP1Q5JTV8 583 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 KHDRBS2Q5VWX1 349 aaKnown RBP15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 DCUN1D3Q8IWE4 304 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 SLC37A3Q8NCC5 494 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 ALG14Q96F25 216 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 STUB1Q9UNE7 303 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 TPD52L2O43399 206 aaKnown RBP15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 CD6P30203 668 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 DHCR24Q15392 516 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 ODF4Q2M2E3 257 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 GGTA1PQ4G0N0 100 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 KLHL22Q53GT1 634 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 LRRC17Q8N6Y2 441 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 SAMD12Q8N8I0 201 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 SLC7A13Q8TCU3 470 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 LCN9Q8WX39 176 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 OR5P2Q8WZ92 322 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 CXorf40BQ96DE9 158 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 EXTL2Q9UBQ6 330 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 HPGDSO60760 199 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 CBLP22681 906 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 DDX6P26196 483 aaKnown RBP eCLIP15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 PRR5P85299 388 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 HYAL2Q12891 473 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 GPR19Q15760 415 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 LRIT3Q3SXY7 679 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 CCNJQ5T5M9 372 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 MVB12BQ9H7P6 319 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 NTNG1Q9Y2I2 539 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 PCDHGA2Q9Y5H1 932 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 MYO16Q9Y6X6 1858 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 TRBV5-3A0A0A0MS03 114 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 MTNR1AP48039 350 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 RPS25P62851 125 aaKnown RBP15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 STX4Q12846 297 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 ZC3H14Q6PJT7 736 aaKnown RBP15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 MSANTD1Q6ZTZ1 278 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 NRMQ8IXM6 262 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 UCN3Q969E3 161 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 MED20Q9H944 212 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 IL21Q9HBE4 155 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 NEUROD4Q9HD90 331 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 ZC4H2Q9NQZ6 224 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 FBXO8Q9NRD0 319 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 HS3ST2Q9Y278 367 aa15.32■□□□□ 0.04
PDZRN3-201ENST00000263666 PRKYO43930 277 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms