RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 FGBP02675 491 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 PCCBP05166 539 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 HNRNPA1P09651 372 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX56-201ENST00000258772 ACADMP11310 421 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 CPEP16870 476 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 RCVRNP35243 200 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 P2RY2P41231 377 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 SSR2P43308 183 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 RFX2P48378 723 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 CLCNKAP51800 687 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 PRKAG1P54619 331 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 CDK3Q00526 305 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 BNC1Q01954 994 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 GPR50Q13585 617 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 GPR19Q15760 415 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 FLYWCH1Q4VC44 716 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 ENTPD8Q5MY95 495 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 NXNL2Q5VZ03 156 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 SLC7A5P1Q8MH63 180 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 NELL2Q99435 816 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 SPATA5L1Q9BVQ7 753 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 SRRQ9GZT4 340 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 TMEM245Q9H330 911 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 FBXW2Q9UKT8 454 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 INSL6Q9Y581 213 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 LRIT2A6NDA9 550 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 CLEC3AO75596 197 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 KRT8P05787 483 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 CHRM4P08173 479 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 GJA8P48165 433 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 NCBP2P52298 156 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX56-201ENST00000258772 COPZ1P61923 177 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 SNAPC1Q16533 368 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 GAB4Q2WGN9 574 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 UAP1L1Q3KQV9 507 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 KLHL22Q53GT1 634 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 ATAT1Q5SQI0 421 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 ARMC4Q5T2S8 1044 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 ZNF793Q6ZN11 406 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 ADCK2Q7Z695 626 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 Q8N9G6 341 aaPredicted RBP14.37□□□□□ -0.11
DDX56-201ENST00000258772 OR6F1Q8NGZ6 308 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 BBS10Q8TAM1 723 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 CAPSLQ8WWF8 208 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 PRRC1Q96M27 445 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 YIPF4Q9BSR8 244 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 CTPS2Q9NRF8 586 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 CARD8Q9Y2G2 431 aa14.37□□□□□ -0.11
DDX56-201ENST00000258772 DNMT3AQ9Y6K1 912 aaPredicted RBP14.37□□□□□ -0.11
DDX56-201ENST00000258772 IGKV1-8A0A0C4DH67 115 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 GLOD5A6NK44 160 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 MAN2B1O00754 1011 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 PRKRAO75569 313 aaKnown RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 MSL3P1P0C860 447 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 IL7P13232 177 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 AZGP1P25311 298 aaKnown RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 BUD31P41223 144 aaPredicted RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 SMSP52788 366 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 GAS1P54826 345 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 SPPL3Q8TCT6 385 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 TMEM203Q969S6 136 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 BBS4Q96RK4 519 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 PLA2G12AQ9BZM1 189 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 CRISPLD2Q9H0B8 497 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 KLHL31Q9H511 634 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 TIGARQ9NQ88 270 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 SPIN1Q9Y657 262 aaPredicted RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 MUC22E2RYF6 1773 aaPredicted RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 IGLON5A6NGN9 336 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 AP3D1O14617 1153 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 CHRM5P08912 532 aaPredicted RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 CLEC2LP0C7M8 214 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 SLC35G4P0C7Q5 338 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 GSTM3P21266 225 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 PTGER1P34995 402 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 CTNNB1P35222 781 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 MAN2A2P49641 1150 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 KHKP50053 298 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 WNT4P56705 351 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 PRDX1Q06830 199 aaKnown RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 FUT5Q11128 374 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 C3orf38Q5JPI3 329 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 C22orf42Q6IC83 251 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 KIAA1161Q6NSJ0 714 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 LAPTM4BQ86VI4 370 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 KIF18BQ86Y91 864 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 CLDN22Q8N7P3 220 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 MSLNLQ96KJ4 702 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 FAIM2Q9BWQ8 316 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 TP63Q9H3D4 680 aaPredicted RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 ABCB9Q9NP78 766 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 MRPS18AQ9NVS2 196 aaKnown RBP14.36□□□□□ -0.11
DDX56-201ENST00000258772 ZNF221Q9UK13 617 aa14.36□□□□□ -0.11
DDX56-201ENST00000258772 ERAL1O75616 437 aaKnown RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 HMGN2P05204 90 aaKnown RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 MYL12AP19105 171 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 NTSP30990 170 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 TAS2R38P59533 333 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 HNRNPA0Q13151 305 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms