RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 NELL2Q99435 816 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 CCDC86Q9H6F5 360 aaKnown RBP12.92□□□□□ -0.34
SF3A1-201ENST00000215793 CREBZFQ9NS37 354 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 TMPRSS11EQ9UL52 423 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 FMN2Q9NZ56 1722 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 M0QZQ0 153 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 MYF6P23409 242 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 ACVR1BP36896 505 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 CRTC1Q6UUV9 634 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 PRSS48Q7RTY5 328 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 MOCOSQ96EN8 888 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 HERPUD2Q9BSE4 406 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 PELI2Q9HAT8 420 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 IL23AQ9NPF7 189 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 TAS2R8Q9NYW2 309 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 TCHHQ07283 1943 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 FEZF1A0PJY2 475 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 TRAPPC13A5PLN9 417 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 AGAP5A6NIR3 686 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 LAMP1P11279 417 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 EIF2S3LQ2VIR3 472 aaKnown RBP12.92□□□□□ -0.34
SF3A1-201ENST00000215793 PLXDC1Q8IUK5 500 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 UBQLNLQ8IYU4 475 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 C12orf76Q8N812 135 aaPredicted RBP12.92□□□□□ -0.34
SF3A1-201ENST00000215793 SCGB1C1Q8TD33 95 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 PXYLP1Q8TE99 480 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 GATAD2BQ8WXI9 593 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 BCL7BQ9BQE9 202 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 SLC17A9Q9BYT1 436 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 PARPBPQ9NWS1 579 aa12.92□□□□□ -0.34
SF3A1-201ENST00000215793 H7C2Y5 167 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 SLC16A8O95907 504 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 H2AFB2P0C5Z0 115 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 CFL1P23528 166 aaKnown RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 HNRNPKP61978 463 aaKnown RBP eCLIP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 FIGNL1Q6PIW4 674 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ZC3H14Q6PJT7 736 aaKnown RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 TTLL10Q6ZVT0 673 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 MAMDC2Q7Z304 686 aaPredicted RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ARHGAP12Q8IWW6 846 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 CLECL1Q8IZS7 167 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ASCC1Q8N9N2 400 aaKnown RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 SORCS1Q8WY21 1168 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 HOXB13Q92826 284 aaPredicted RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 COPZ2Q9P299 210 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 IFNA2P01563 188 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 FIGLAQ6QHK4 219 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ENPP6Q6UWR7 440 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 MRPL10Q7Z7H8 261 aaKnown RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 TMEM151AQ8N4L1 468 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 CCDC32Q9BV29 185 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 FUNDC2Q9BWH2 189 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 STRA6Q9BX79 667 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 TMEM168Q9H0V1 697 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 C8orf33Q9H7E9 229 aaPredicted RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 KCNK12Q9HB15 430 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 FOLH1BQ9HBA9 442 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 C14orf119Q9NWQ9 140 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 COL14A1Q05707 1796 aaKnown RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 GRXCR2A6NFK2 248 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 SFTPBP07988 381 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ADRB3P13945 408 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 HTR6P50406 440 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ZNF252P-AS1Q0IIN9 211 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 EFR3AQ14156 821 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 GK3PQ14409 553 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ARL6IP1Q15041 203 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 GPR150Q8NGU9 434 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 OR4K3Q96R72 315 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ACTRT3Q9BYD9 372 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 NOTOA8MTQ0 251 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 G3V2L1 256 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 NME4O00746 187 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 POLR1CO15160 346 aaPredicted RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 CREBL2O60519 120 aaPredicted RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ZNF865P0CJ78 1059 aaPredicted RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 OSMP13725 252 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 AGTR1P30556 359 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 CD70P32970 193 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 GGT2P36268 569 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 PGGT1BP53609 377 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 FGL1Q08830 312 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 MFSD13AQ14CX5 517 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 CCBE1Q6UXH8 406 aaPredicted RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 LSM14AQ8ND56 463 aaKnown RBP12.91□□□□□ -0.34
SF3A1-201ENST00000215793 SLC6A7Q99884 636 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 RNF38Q9H0F5 515 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 ARMC1Q9NVT9 282 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 IL17CQ9P0M4 197 aa12.91□□□□□ -0.34
SF3A1-201ENST00000215793 A0A1W2PPK0 400 aa12.9□□□□□ -0.34
SF3A1-201ENST00000215793 TTLL8A6PVC2 850 aa12.9□□□□□ -0.34
SF3A1-201ENST00000215793 FMO6PO60774 539 aa12.9□□□□□ -0.34
SF3A1-201ENST00000215793 GPR37L1O60883 481 aa12.9□□□□□ -0.34
SF3A1-201ENST00000215793 GPR4P46093 362 aa12.9□□□□□ -0.34
SF3A1-201ENST00000215793 FNTBP49356 437 aa12.9□□□□□ -0.34
SF3A1-201ENST00000215793 SIM1P81133 766 aaPredicted RBP12.9□□□□□ -0.34
SF3A1-201ENST00000215793 NDUFAF5Q5TEU4 345 aa12.9□□□□□ -0.34
SF3A1-201ENST00000215793 VTCN1Q7Z7D3 282 aa12.9□□□□□ -0.34
SF3A1-201ENST00000215793 TSPAN33Q86UF1 283 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms