RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ZBTB44Q8NCP5 570 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ARNTL2Q8WYA1 636 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 RAB8BQ92930 207 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 FCRL1Q96LA6 429 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SLC38A1Q9H2H9 487 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 A0A0A6YYH2 397 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 hCG_1807616A0A1W2PRN6 198 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 A6NJ64 397 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 AHSA1O95433 338 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 LATS1O95835 1130 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 GBAP04062 536 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 CBSLP0DN79 551 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 PPP3CBP16298 524 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 CHATP28329 748 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 CCKBRP32239 447 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 CBSP35520 551 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 CPOXP36551 454 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 MLLT3P42568 568 aaPredicted RBP9.98□□□□□ -0.81
VCL-201ENST00000211998 MTNR1AP48039 350 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ABHD13Q7L211 337 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ZFP82Q8N141 532 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 B3GNT7Q8NFL0 401 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 MALSU1Q96EH3 234 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 PINK1Q9BXM7 581 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SLC5A7Q9GZV3 580 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ADAP2Q9NPF8 381 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 INSL6Q9Y581 213 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 MYH7BA7E2Y1 1941 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 KAT6AQ92794 2004 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 IFNA5P01569 189 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 CD1DP15813 335 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 LASP1Q14847 261 aaKnown RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 INAVAQ3KP66 663 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 GPR157Q5UAW9 335 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 LNX2Q8N448 690 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 OR2T33Q8NG76 320 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 OR52E4Q8NGH9 312 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 OR10K1Q8NGX5 313 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 LRRC46Q96FV0 321 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 CD244Q9BZW8 370 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 SARDHQ9UL12 918 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 TRBV2A0A0J9YWF9 115 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 SOX30O94993 753 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 ACPPP15309 386 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 RHCEP18577 417 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 C21orf33P30042 268 aaPredicted RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 SLC6A6P31641 620 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 FRKP42685 505 aaPredicted RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 WNT4P56705 351 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 PAFAH1B3Q15102 231 aaKnown RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 RNF151Q2KHN1 245 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 PCGF3Q3KNV8 242 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 FAM69AQ5T7M9 428 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 LACC1Q8IV20 430 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 ACBD7Q8N6N7 88 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 TMEM102Q8N9M5 508 aaPredicted RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 ACOT11Q8WXI4 607 aaPredicted RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 SORCS1Q8WY21 1168 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 PIGVQ9NUD9 493 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 DZANK1Q9NVP4 752 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 LAMP5Q9UJQ1 280 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 BPNT1O95861 308 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 HRGP04196 525 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 CD3GP09693 182 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 SYN1P17600 705 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 STC1P52823 247 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 GPM6BQ13491 265 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 MRPL41Q8IXM3 137 aaKnown RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 KDM1BQ8NB78 822 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 ELP4Q96EB1 424 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 SLC41A3Q96GZ6 507 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 MRM3Q9HC36 420 aaKnown RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 KLHL21Q9UJP4 597 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 MYOM1P52179 1685 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 A6NIN4 97 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 MMP12P39900 470 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 CLCN7P51798 805 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 CXCR4P61073 352 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 PAGE3Q5JUK9 113 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 ZNF783Q6ZMS7 281 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 CYS1Q717R9 158 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 CELF5Q8N6W0 485 aaKnown RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 ZNF283Q8N7M2 679 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 HCAR2Q8TDS4 363 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 GIMAP1Q8WWP7 306 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 THRSPQ92748 146 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.97□□□□□ -0.81
VCL-201ENST00000211998 DNTTIP1Q9H147 329 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 MYH8P13535 1937 aa9.97□□□□□ -0.81
VCL-201ENST00000211998 ITGA5P08648 1049 aa9.96□□□□□ -0.81
VCL-201ENST00000211998 ADH5P11766 374 aa9.96□□□□□ -0.81
VCL-201ENST00000211998 ZNF30P17039 623 aa9.96□□□□□ -0.81
VCL-201ENST00000211998 PRKCAP17252 672 aa9.96□□□□□ -0.81
VCL-201ENST00000211998 CSNK2A2P19784 350 aaPredicted RBP9.96□□□□□ -0.81
VCL-201ENST00000211998 GABRB3P28472 473 aa9.96□□□□□ -0.81
VCL-201ENST00000211998 DLX5P56178 289 aa9.96□□□□□ -0.81
VCL-201ENST00000211998 APOFQ13790 326 aa9.96□□□□□ -0.81
VCL-201ENST00000211998 TSTD1Q8NFU3 115 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms