RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TRIM43Q96BQ3 446 aaPredicted RBP17.91■□□□□ 0.46
MBD3-201ENST00000156825 NXPE2Q96DL1 559 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 SGTBQ96EQ0 304 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 ZFYVE21Q9BQ24 234 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 BRF2Q9HAW0 419 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 CNIH4Q9P003 139 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 SH2B3Q9UQQ2 575 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 USP3Q9Y6I4 520 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 CHD4Q14839 1912 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 PROS1P07225 676 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 SEC23BQ15437 767 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 LRRC37A5PQ49AS3 106 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 MANEALQ5VSG8 457 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 LARP4Q71RC2 724 aaKnown RBP eCLIP17.91■□□□□ 0.46
MBD3-201ENST00000156825 GID4Q8IVV7 300 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 POGLUT1Q8NBL1 392 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 CCDC107Q8WV48 283 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 LGALS12Q96DT0 336 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 TMEM184CQ9NVA4 438 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 F5P12259 2224 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 A0A0A6YYC8 382 aaPredicted RBP17.91■□□□□ 0.46
MBD3-201ENST00000156825 FAM227AF5H4B4 570 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 I3L1I5 382 aaPredicted RBP17.91■□□□□ 0.46
MBD3-201ENST00000156825 T-ENOLP0DO92 83 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 TIMP2P16035 220 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 STT3AP46977 705 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 ZNF140P52738 457 aaPredicted RBP17.91■□□□□ 0.46
MBD3-201ENST00000156825 RGNQ15493 299 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 TMPRSS12Q86WS5 348 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 INO80EQ8NBZ0 244 aaPredicted RBP17.91■□□□□ 0.46
MBD3-201ENST00000156825 CPEB1Q9BZB8 566 aaKnown RBP17.91■□□□□ 0.46
MBD3-201ENST00000156825 PREBQ9HCU5 417 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 MED11Q9P086 117 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 RARRES3Q9UL19 164 aa17.91■□□□□ 0.46
MBD3-201ENST00000156825 DHRS4L1P0CG22 281 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 NR2C1P13056 603 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 NADSYN1Q6IA69 706 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 IGFN1Q86VF2 1251 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 PSD4Q8NDX1 1056 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 STRADBQ9C0K7 418 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 EBF1Q9UH73 591 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 C5P01031 1676 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 LDB3O75112 727 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 RDH16O75452 317 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 ZNF888P0CJ79 500 aaPredicted RBP17.9■□□□□ 0.46
MBD3-201ENST00000156825 PEPDP12955 493 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 MYRFLQ96LU7 910 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 TREX1Q9NSU2 369 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 ASB6Q9NWX5 421 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 TRBV2A0A0J9YWF9 115 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 MEN1O00255 615 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 KIAA0513O60268 411 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 OCLNQ16625 522 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 HSD17B12Q53GQ0 312 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 NECTIN4Q96NY8 510 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 SLC29A1Q99808 456 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 VNN2O95498 520 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 ZNF806P0C7X5 589 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 SNU13P55769 128 aaKnown RBP17.9■□□□□ 0.46
MBD3-201ENST00000156825 TAS2R43P59537 309 aa17.9■□□□□ 0.46
MBD3-201ENST00000156825 L7N2F9 121 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 SGK494L7N484 410 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 EEF1E1O43324 174 aaKnown RBP17.89■□□□□ 0.46
MBD3-201ENST00000156825 HSD17B1P14061 328 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 OXTRP30559 389 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 VAMP2P63027 116 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 GRM7Q14831 915 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 ZNF829Q3KNS6 432 aaPredicted RBP17.89■□□□□ 0.46
MBD3-201ENST00000156825 RAB41Q5JT25 222 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 LCN8Q6JVE9 175 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 PLEKHG7Q6ZR37 379 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 ACPTQ9BZG2 426 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 HEBP1Q9NRV9 189 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 MRPL15Q9P015 296 aaKnown RBP17.89■□□□□ 0.46
MBD3-201ENST00000156825 TMEM9Q9P0T7 183 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 EPHA6Q9UF33 1036 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 CCL26Q9Y258 94 aa17.89■□□□□ 0.46
MBD3-201ENST00000156825 MAGED1Q9Y5V3 778 aaPredicted RBP17.89■□□□□ 0.46
MBD3-201ENST00000156825 RFXAPO00287 272 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 GXYLT1Q4G148 440 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 TMEM173Q86WV6 379 aaPredicted RBP17.89■□□□□ 0.45
MBD3-201ENST00000156825 GALNT11Q8NCW6 608 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 NR4A3Q92570 626 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 ZDHHC7Q9NXF8 308 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 BAIAP2Q9UQB8 552 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 SLC1A7O00341 560 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 GRK5P34947 590 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 PHC1P78364 1004 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 TUBA3CQ13748 450 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 HTR3DQ70Z44 454 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 PLXDC1Q8IUK5 500 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 ANTXRLA6NF34 631 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 MAPK3P27361 379 aaPredicted RBP17.89■□□□□ 0.45
MBD3-201ENST00000156825 NCS1P62166 190 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 KCTD18Q6PI47 426 aaPredicted RBP17.89■□□□□ 0.45
MBD3-201ENST00000156825 PROKR1Q8TCW9 393 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 C8orf33Q9H7E9 229 aaPredicted RBP17.89■□□□□ 0.45
MBD3-201ENST00000156825 NUP98P52948 1817 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 C4BP0C0L5 1744 aa17.89■□□□□ 0.45
MBD3-201ENST00000156825 GXYLT2A0PJZ3 443 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms