RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 BpifcQ8C186 509 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 SinhcafQ8C8M1 221 aaKnown RBP9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Ccm2Q8K2Y9 453 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Chrna3Q8R4G9 499 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Lsm7Q9CQQ8 103 aaKnown RBP9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Elovl4Q9EQC4 312 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Xlr5bA2BI50 236 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Cops4O88544 406 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Hoxa4P06798 285 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Ccnb2P30276 398 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Polr2lP62876 67 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Ugt2b36Q3UEP4 530 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Fgl1Q71KU9 314 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Krt75Q8BGZ7 551 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Mblac2Q8BL86 279 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Rbm34Q8C5L7 375 aaKnown RBP9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Olfr1033Q8VFK5 310 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 MmadhcQ99LS1 296 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Slc10a6Q9CXB2 373 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Shcbp1lQ3TTP0 639 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Zc3hav1Q3UPF5 946 aaKnown RBP9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Elmod1Q3V1U8 326 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Fam20cQ5MJS3 579 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Snx6Q6P8X1 406 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Tas2r13Q7M720 305 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Olfr309Q7TS01 308 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Txnl4bQ8BUH1 149 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Pdlim5Q8CI51 591 aaKnown RBP9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Ash1lQ99MY8 2958 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 GabarapQ9DCD6 117 aa9.39□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Tcte1A6H639 498 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Mc3rP33033 323 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 PdxpP60487 292 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Hpcal1P62748 193 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Rundc3bQ6PDC0 408 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Tha1Q6XPS7 400 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 JamlQ80UL9 379 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Galnt7Q80VA0 657 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Acsm4Q80W40 580 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Nrde2Q80XC6 1172 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Rap2aQ80ZJ1 183 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Reep1Q8BGH4 201 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 MaelQ8BVN9 434 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Mblac1Q8BWY4 260 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Irak2Q8CFA1 622 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 DhrsxQ8VBZ0 335 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Rpe65Q91ZQ5 533 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Apbb2Q9DBR4 760 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 NsdhlQ9R1J0 362 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 ProdhQ9WU79 599 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Gm15013V9GWY0 266 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Pde4dipQ80YT7 2224 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Zfp534A2A7A1 661 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Gm11758A2BEI6 360 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Gm11757A2BEI8 360 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Btbd35f28A2CFD5 498 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Atp6ap1lD3Z5W0 336 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Btbd35f30J3QML3 498 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Vmn2r117K7N6V1 857 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Fabp3P11404 133 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Gsta1P13745 223 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Cav3P51637 151 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Rad51Q08297 339 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 PomkQ3TUA9 349 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Chsy3Q5DTK1 884 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Nrsn2Q5HZK2 202 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Elavl3Q60900 367 aaKnown RBP9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Dvl3Q61062 716 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Ugt8Q64676 541 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Gsta1Q6P8Q0 223 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Trmt61aQ80XC2 290 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 ExogQ8C163 368 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Wdr37Q8CBE3 496 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Ppwd1Q8CEC6 646 aaKnown RBP9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Tbc1d14Q8CGA2 694 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Adam4Q8CGQ2 763 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Gpr18Q8K1Z6 331 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Ddx52Q8K301 598 aaKnown RBP9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Papd4Q91YI6 484 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 DlstQ9D2G2 454 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Rhox2aQ9D4Y3 191 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Gpr88Q9EPB7 384 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 NbeaQ9EPN1 2936 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Kcng1A2BDX4 514 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Esp18A8R0V1 91 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Irs3O54718 495 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Zp2P20239 713 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Bpifa1P97361 278 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Samd12Q0VE29 161 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Pdss2Q33DR3 401 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 WhammQ571B6 793 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Q5SPV6 233 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Tvp23aQ6NVH0 222 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Tas2r140Q7TQA4 312 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Csgalnact1Q8BJQ9 530 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 MdficQ8BX65 247 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Lsm14aQ8K2F8 462 aaKnown RBP9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Olfr166Q8VGX2 312 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Slc15a4Q91W98 574 aa9.38□□□□□ -0.91
Rnft1-201ENSMUST00000020827 Cstf3Q99LI7 717 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms