RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Fbxl19Q6PB97 674 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Prr14Q7TPN9 612 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Zbtb42Q811H0 420 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Sidt2Q8CIF6 832 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Tma7Q8K003 64 aaKnown RBP15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 LctlQ8K1F9 566 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 NotumQ8R116 503 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Grip1Q925T6 1127 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Lims1Q99JW4 325 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Atp5dQ9D3D9 168 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 PrelpQ9JK53 378 aa15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Zdbf2Q5SS00 2493 aaKnown RBP15.59■□□□□ 0.09
Shh-201ENSMUST00000002708 Rp1l1Q8CGM2 1859 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Trbv20A0A0B4J1H5 111 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Olfr59B1ARL3 323 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Tex264E9Q137 309 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Gstm6O35660 218 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Reps1O54916 795 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 RngttO55236 597 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Mpzl2O70255 215 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Atp6v1e1P50518 226 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 TepsinQ3U3N6 573 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Gm732Q3V0P9 516 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Slc27a5Q4LDG0 689 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Atp11bQ6DFW5 1175 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Kiss1Q6Y4S4 130 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Cd99l2Q8BIF0 237 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Atp6v1hQ8BVE3 483 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Tram1l1Q8QZR0 363 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Vmn1r219Q8R271 312 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 NclnQ8VCM8 563 aaKnown RBP15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Snx4Q91YJ2 450 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Mzt2Q9CQ25 159 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 TrehQ9JLT2 576 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Kntc1Q8C3Y4 2207 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Golga4Q91VW5 2238 aa15.58■□□□□ 0.09
Shh-201ENSMUST00000002708 Gm44973A0A140LJJ1 189 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Phox2bO35690 314 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 JtbO88824 146 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 FhitO89106 150 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Ctnnb1Q02248 781 aaKnown RBP15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Rab42Q0PD08 215 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr681Q3SXH8 315 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Spire1Q52KF3 598 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Gdi2Q61598 445 aaKnown RBP15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Irf4Q64287 450 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Pomt2Q8BGQ4 820 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Derl2Q8BNI4 239 aaKnown RBP15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 IlvblQ8BU33 632 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Gprin3Q8BWS5 763 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Wdr26Q8C6G8 641 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Klhl25Q8R2P1 589 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr1093Q8VF14 322 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr450Q8VF81 310 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr45Q8VGM1 311 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr679Q8VGV0 315 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Tmem168Q91VX9 697 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Dusp7Q91Z46 422 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Camk2gQ923T9 529 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Znf524Q9D0B1 321 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Lpar3Q9EQ31 354 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Eif4hQ9WUK2 248 aaKnown RBP15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 ReckQ9Z0J1 971 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 CcniQ9Z2V9 377 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Szt2A2A9C3 3431 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Igkv16-104A0A0B4J1I1 116 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Gm8180E9PXN0 145 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Gm3476K7N6V0 257 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Mapk12O08911 367 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Csf2P01587 141 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 ThpoP40226 356 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Nsg2P47759 171 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 PdxpP60487 292 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Gpr143P70259 405 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Katnb1Q8BG40 658 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Fbxo30Q8BJL1 746 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Btnl10Q9JK39 275 aa15.58■□□□□ 0.08
Shh-201ENSMUST00000002708 Gm5938A2AEN9 163 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Gm14139F6ZS36 494 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Dcpp3L7N259 170 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Gm6401L7N2C0 213 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Efna3O08545 230 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 MgllO35678 303 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Lsm2O35900 95 aaKnown RBP15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Nid1P10493 1245 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Xkr9Q5GH62 373 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 MuskQ61006 868 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Il10raQ61727 575 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Hist2h2aa1Q6GSS7 130 aaKnown RBP15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 EloaQ8CB77 773 aaKnown RBP15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Scara5Q8K299 491 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Slc26a5Q99NH7 744 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Asf1aQ9CQE6 204 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Phc2Q9QWH1 850 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Cfap77A0A087WRI3 283 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Cd163l1A0A1B0GSB0 991 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Gm6710A2ART0 554 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr1188A2AV10 312 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Col19a1Q0VF58 1136 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Ccdc177Q3UHB8 706 aa15.57■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms