RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 B3GNT7Q8NFL0 401 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 BBS10Q8TAM1 723 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 LGALS12Q96DT0 336 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 BMFQ96LC9 184 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 WDR92Q96MX6 357 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 ALOXE3Q9BYJ1 711 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 PALMDQ9NP74 551 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 A4GNTQ9UNA3 340 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 M0R3H8 397 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 OR10H3O60404 316 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 MPZL2O60487 215 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 EPPINO95925 133 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 OSMP13725 252 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 CSNK2A2P19784 350 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-211ENST00000641213 ACSL1P33121 698 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 OCA2Q04671 838 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 PTCHD4Q6ZW05 846 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 VN1R4Q7Z5H5 301 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 KCT2Q8NC54 265 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 SLC7A13Q8TCU3 470 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 MOAP1Q96BY2 351 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 VMP1Q96GC9 406 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 C16orf58Q96GQ5 468 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 MRGPRX1Q96LB2 322 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 FCRL4Q96PJ5 515 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 PCOLCE2Q9UKZ9 415 aa16.09■□□□□ 0.17
PHGDH-211ENST00000641213 TRBV23OR9-2A0A075B6M9 112 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 SH3D21A4FU49 640 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 TOR1BO14657 336 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 ZW10O43264 779 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 NARSO43776 548 aaKnown RBP16.08■□□□□ 0.16
PHGDH-211ENST00000641213 NADKO95544 446 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-211ENST00000641213 FHP07954 510 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 ACADMP11310 421 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 ANXA11P50995 505 aaKnown RBP16.08■□□□□ 0.16
PHGDH-211ENST00000641213 SMIM11AP58511 58 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 BTN3A2P78410 334 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 ILKQ13418 452 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 PIN1Q13526 163 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-211ENST00000641213 DGUOKQ16854 277 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 TIGD6Q17RP2 521 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 PGBD2Q6P3X8 592 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 FAM92BQ6ZTR7 304 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 FAM46DQ8NEK8 389 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 OR56A1Q8NGH5 318 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 SPATA5L1Q9BVQ7 753 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 TMEM168Q9H0V1 697 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 SRMSQ9H3Y6 488 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 KCNE3Q9Y6H6 103 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 PMF1-BGLAPU3KQ54 211 aa16.08■□□□□ 0.16
PHGDH-211ENST00000641213 UGT2B17O75795 530 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 APBB3O95704 486 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 IGFBP1P08833 259 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-211ENST00000641213 MPIP34949 423 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 TGFBR1P36897 503 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 ACTR1BP42025 376 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 ACTR1AP61163 376 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 RPS15AP62244 130 aaKnown RBP16.07■□□□□ 0.16
PHGDH-211ENST00000641213 IRF3Q14653 427 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 NR1D2Q14995 579 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 CEBPEQ15744 281 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 DGLUCYQ7Z3D6 616 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 HMGN2P46Q86SG4 172 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 FLVCR1-AS1Q8TAF5 88 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 ZNF675Q8TD23 568 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 ZNF681Q96N22 645 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 C11orf16Q9NQ32 467 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 CLN6Q9NWW5 311 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 LYARQ9NX58 379 aaKnown RBP16.07■□□□□ 0.16
PHGDH-211ENST00000641213 A0A0G2JPF8 293 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 EFCAB9A8MZ26 197 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 HNRNPCL2B2RXH8 293 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 HNRNPCL3B7ZW38 293 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 EMC8O43402 210 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 PFDN1O60925 122 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 SOX14O95416 240 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 HNRNPCL4P0DMR1 293 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 ADORA3P0DMS8 318 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 UGT2B15P54855 530 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 TGM3Q08188 693 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 GNA13Q14344 377 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 KIAA1324Q6UXG2 1013 aaKnown RBP16.07■□□□□ 0.16
PHGDH-211ENST00000641213 LINC00299Q6ZSB3 139 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 TRIM69Q86WT6 500 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 GAL3ST3Q96A11 431 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 BTBD2Q9BX70 525 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 AKIP1Q9NQ31 210 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 GIMAP4Q9NUV9 329 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 SLC9A8Q9Y2E8 581 aa16.07■□□□□ 0.16
PHGDH-211ENST00000641213 CLDN25C9JDP6 229 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 TLR4O00206 839 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 LGI1O95970 557 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 PTHP01270 115 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ZNF888P0CJ79 500 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-211ENST00000641213 IDUAP35475 653 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 MC3RP41968 323 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 SERPINB10P48595 397 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 SNRPNP63162 240 aaKnown RBP16.06■□□□□ 0.16
PHGDH-211ENST00000641213 PRR5P85299 388 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ZNF846Q147U1 533 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms