RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PCDHGB4Q9UN71 923 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 PROCRQ9UNN8 238 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 ERVK-11Q9UQG0 969 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 COA3Q9Y2R0 106 aaPredicted RBP3.05□□□□□ -1.92
CCDC7-213ENST00000639290 FADS2P1A8MWK0 482 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 PRAMEF11O60813 436 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 ACTL6BO94805 426 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 PGLSO95336 258 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 NDST3O95803 873 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 PLATP00750 562 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 IGLV1-40P01703 118 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 PPIAL4GP0DN37 164 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 ATP5F1P24539 256 aaPredicted RBP3.05□□□□□ -1.92
CCDC7-213ENST00000639290 GTF2H1P32780 548 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 ARL3P36405 182 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 HNF4AP41235 474 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 SPINT3P49223 89 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 PPOXP50336 477 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 EIF3BP55884 814 aaKnown RBP3.05□□□□□ -1.92
CCDC7-213ENST00000639290 SLC35A2P78381 396 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 DUSP8Q13202 625 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 MAMLD1Q13495 774 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 FAM53BQ14153 422 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 PRTGQ2VWP7 1150 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 LRRC66Q68CR7 880 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 ZNF793Q6ZN11 406 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 BEND4Q6ZU67 534 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 BTN2A1Q7KYR7 527 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 ZNF786Q8N393 782 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 C11orf42Q8N5U0 333 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 NAT8LQ8N9F0 302 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 OR6Y1Q8NGX8 325 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 UBASH3BQ8TF42 649 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 DYRK2Q92630 601 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 ABTB1Q969K4 478 aaPredicted RBP3.05□□□□□ -1.92
CCDC7-213ENST00000639290 NT5C3BQ969T7 300 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 RNF125Q96EQ8 232 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 INTS4Q96HW7 963 aaKnown RBP3.05□□□□□ -1.92
CCDC7-213ENST00000639290 LINC00615Q96LM1 132 aaPredicted RBP3.05□□□□□ -1.92
CCDC7-213ENST00000639290 C12orf66Q96MD2 445 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 WDR24Q96S15 920 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 DEFB126Q9BYW3 111 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 SIK2Q9H0K1 926 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 UGT1A10Q9HAW8 530 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 STOML1Q9UBI4 398 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 LSM4Q9Y4Z0 139 aaKnown RBP3.05□□□□□ -1.92
CCDC7-213ENST00000639290 PRR14LQ5THK1 2151 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 ZNF407Q9C0G0 2248 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
CCDC7-213ENST00000639290 SAGE2PA6NJ88 616 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 CXorf49A8MYA2 514 aaPredicted RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 RAMP3O60896 148 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 CDH16O75309 829 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 ERAL1O75616 437 aaKnown RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 INAFM2P0DMQ5 153 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 PSMA4P25789 261 aaKnown RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 GABRB3P28472 473 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 IL2RGP31785 369 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 CDK9P50750 372 aaKnown RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 PRKAA2P54646 552 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 TPD52P55327 224 aaPredicted RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 SESN2P58004 480 aaPredicted RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 MRPS35P82673 323 aaKnown RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 RELAQ04206 551 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 RASGEF1BQ0VAM2 473 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 FUT7Q11130 342 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 RIN1Q13671 783 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 KRT33BQ14525 404 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 GUSBP1Q15486 140 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 BAK1Q16611 211 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 CA9Q16790 459 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 KHDC1Q4VXA5 237 aaKnown RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 SFT2D3Q587I9 215 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 TMEM65Q6PI78 240 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 CYP2R1Q6VVX0 501 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 MDGA2Q7Z553 956 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 ZDHHC17Q8IUH5 632 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 RHOT2Q8IXI1 618 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 UMODL1-AS1Q8N2C9 162 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 OTUD6BQ8N6M0 293 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 CLEC4CQ8WTT0 213 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 NOC3LQ8WTT2 800 aaKnown RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 ASB15Q8WXK1 588 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 INTS12Q96CB8 462 aaKnown RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 Q96M66 194 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 OR1F2PQ96R84 312 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 NUDCD1Q96RS6 583 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 TUBGCP2Q9BSJ2 902 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 ACTR6Q9GZN1 396 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 MEGF9Q9H1U4 602 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 RABEP2Q9H5N1 569 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 AGPAT3Q9NRZ7 376 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 TUBA8Q9NY65 449 aaPredicted RBP3.04□□□□□ -1.92
CCDC7-213ENST00000639290 CNIH4Q9P003 139 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 ZNF175Q9Y473 711 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 X6R8D5 127 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 DNAH6Q9C0G6 4158 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 SHISA3A0PJX4 238 aa3.04□□□□□ -1.92
CCDC7-213ENST00000639290 MGAT4DA6NG13 374 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms