RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 MPP7Q5T2T1 576 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 C17orf99Q6UX52 265 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 TRILQ7L0X0 811 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 LRRC17Q8N6Y2 441 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 HORMAD2Q8N7B1 307 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 OR5P2Q8WZ92 322 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 GPR137Q96N19 417 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 OR51B5Q9H339 312 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 EIF3KQ9UBQ5 218 aaKnown RBP14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 FAM8A1Q9UBU6 413 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 ELF5Q9UKW6 265 aaPredicted RBP14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 ANKDD1BA6NHY2 528 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 OR2AG2A6NM03 316 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 NPC1O15118 1278 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 GREM1O60565 184 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 POP4O95707 220 aaKnown RBP14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 GALTP07902 379 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 IL3P08700 152 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 IFI30P13284 250 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 MTNR1AP48039 350 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 CAV3P56539 151 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 DCDC1P59894 354 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 NFE2L1Q14494 772 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 ANKRD54Q6NXT1 300 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 PODNL1Q6PEZ8 512 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 LRRC56Q8IYG6 542 aaPredicted RBP14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 UBE2E3Q969T4 207 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 VOPP1Q96AW1 172 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 FNDC11Q9BVV2 318 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 SLC28A3Q9HAS3 691 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 NEUROD4Q9HD90 331 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 GLTPQ9NZD2 209 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 TAAR2Q9P1P5 351 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 SEC14L3Q9UDX4 400 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 LSM7Q9UK45 103 aaKnown RBP14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 NCKAP1Q9Y2A7 1128 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 BACE2Q9Y5Z0 518 aa14.02□□□□□ -0.17
CACNA1A-220ENST00000635988 SAP18O00422 153 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 ATG13O75143 517 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 SLC22A5O76082 557 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 DHFRP00374 187 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 PER3P56645 1201 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 CDONQ4KMG0 1287 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 TOR2AQ5JU69 321 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 ENTPD8Q5MY95 495 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 ACSM5Q6NUN0 579 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 TNFAIP8L2Q6P589 184 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 PRICKLE2Q7Z3G6 844 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 HDDC2Q7Z4H3 204 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 C2orf69Q8N8R5 385 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 FBXO15Q8NCQ5 510 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 FIBINQ8TAL6 211 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 NEIL3Q8TAT5 605 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 SMG7Q92540 1137 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 TMEM169Q96HH4 297 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 MED28Q9H204 178 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 MAT2BQ9NZL9 334 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 A4GNTQ9UNA3 340 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 AUP1Q9Y679 476 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 SLC5A10A0PJK1 596 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 SMLR1H3BR10 107 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 AKAP8O43823 692 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 BNIP3LO60238 219 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 KLHL18O94889 574 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 RB1P06400 928 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 GALP22466 123 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 MMP11P24347 488 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 SLC6A1P30531 599 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 OPRD1P41143 372 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 TBPL1P62380 186 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 PRSS53Q2L4Q9 553 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 MPPE1Q53F39 396 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 C1orf94Q6P1W5 598 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 TMEM107Q6UX40 140 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 PCSK9Q8NBP7 692 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 OR4K5Q8NGD3 323 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 ADAMTS19Q8TE59 1207 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 ZNF431Q8TF32 576 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 ZDHHC6Q9H6R6 413 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 FBXW2Q9UKT8 454 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 CLCA2Q9UQC9 943 aa14.01□□□□□ -0.17
CACNA1A-220ENST00000635988 OR5K3A6NET4 321 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 TMEM202A6NGA9 273 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 FABP7O15540 132 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 TSPAN6O43657 245 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 PDGFAP04085 211 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 UBL4AP11441 157 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 NPPBP16860 134 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 RPL17P18621 184 aaKnown RBP14□□□□□ -0.17
CACNA1A-220ENST00000635988 AVPR1BP47901 424 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 ACSM1Q08AH1 577 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 TMEM44Q2T9K0 475 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 C22orf39Q6P5X5 142 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 TEX261Q6UWH6 196 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 ZER1Q7Z7L7 766 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 RBM45Q8IUH3 476 aaKnown RBP14□□□□□ -0.17
CACNA1A-220ENST00000635988 TRAM1L1Q8N609 369 aa14□□□□□ -0.17
CACNA1A-220ENST00000635988 ARIH2OSQ8N7S6 290 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms