RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 STYXQ8WUJ0 223 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ABCD2Q9UBJ2 740 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FRS3O43559 492 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ALDOCP09972 364 aaKnown RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ETFAP13804 333 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 RAB3AP20336 220 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 PCGF3Q3KNV8 242 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 CEACAM20Q6UY09 585 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ADAMTSL2Q86TH1 951 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF546Q86UE3 836 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 NRROSQ86YC3 692 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 CMASQ8NFW8 434 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 AP1S3Q96PC3 154 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SPOCK3Q9BQ16 436 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 CCDC3Q9BQI4 270 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SLC6A17Q9H1V8 727 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MED20Q9H944 212 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MEPEQ9NQ76 525 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ALDH1A2O94788 518 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 C8orf89P0DMQ9 161 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 CKBP12277 381 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 GNSP15586 552 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 BMP7P18075 431 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 NR0B1P51843 470 aaKnown RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SREBF2Q12772 1141 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 PPIGQ13427 754 aaKnown RBP eCLIP4.81□□□□□ -1.647e-7■■■□□ 15.7
VPS13D-214ENST00000620676 PTPRRQ15256 657 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ABI3BPQ7Z7G0 1075 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FAM151AQ8WW52 585 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SORCS1Q8WY21 1168 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 NT5C3BQ969T7 300 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MYO19Q96H55 970 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF282Q9UDV7 671 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SMCO3A2RU48 225 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 GPX5O75715 221 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 PROZP22891 400 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FPR3P25089 353 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 BDKRB2P30411 391 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MAJINQ3KP22 176 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 DNASE1L2Q92874 299 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SYT4Q9H2B2 425 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 USP36Q9P275 1121 aaKnown RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 PRELID3BQ9Y3B1 194 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 EFCAB6Q5THR3 1501 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ROBO3Q96MS0 1386 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 TRBV23OR9-2A0A075B6M9 112 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 METTL15A6NJ78 407 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 TGFB3P10600 412 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 HAAOP46952 286 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SGSHP51688 502 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ILKQ13418 452 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SQSTM1Q13501 440 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 KIAA0141Q14154 515 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FAM171A1Q5VUB5 890 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 NAGSQ8N159 534 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 OR7D4Q8NG98 312 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SCAMP5Q8TAC9 235 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 HHIPL1Q96JK4 782 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ARL5CA6NH57 179 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FLI1Q01543 452 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 GAB1Q13480 694 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 C6orf136Q5SQH8 315 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM65Q6PI78 240 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ZSWIM9Q86XI8 627 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 CLRN3Q8NCR9 226 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ST6GAL2Q96JF0 529 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 PIGQQ9BRB3 760 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SLC38A1Q9H2H9 487 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 GULP1Q9UBP9 304 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 CCSO14618 274 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 RHOP08100 348 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 RRASP10301 218 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 DAOP14920 347 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 PTPRAP18433 802 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 AIF1P55008 147 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 EMX2Q04743 252 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FOXM1Q08050 763 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MICAQ29983 383 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ZBTB37Q5TC79 503 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FAM111BQ6SJ93 734 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MINDY1Q8N5J2 469 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 NECAP1Q8NC96 275 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF707Q96C28 371 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF354BQ96LW1 612 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ADAD1Q96M93 576 aaKnown RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 NUDT4Q9NZJ9 180 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SLC22A14Q9Y267 594 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ANKRD66B4E2M5 251 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 M0R2N6 131 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 HLA-FP30511 346 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SPIN3Q5JUX0 258 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SLC36A4Q6YBV0 504 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 CILP2Q8IUL8 1156 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF676Q8N7Q3 588 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 GEMIN6Q8WXD5 167 aaKnown RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MARC2Q969Z3 335 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 NUBP2Q9Y5Y2 271 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SOX15O60248 233 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 OR2C1O95371 312 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MMP10P09238 476 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms