RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 UGT2B15P54855 530 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 CCDC116Q8IYX3 515 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 SIMC1Q8NDZ2 872 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 FEVQ99581 238 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 TCRBV21S2A2A0A5A6 115 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 EFCAB10A6NFE3 127 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 IL7P13232 177 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 HOXA9P31269 272 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 OLR1P78380 273 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 LEXMQ3ZCV2 418 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 PIP5KL1Q5T9C9 394 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 TAF8Q7Z7C8 310 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 RBM45Q8IUH3 476 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 OR2L2Q8NH16 312 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 RPLP0P6Q8NHW5 317 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 OTULINQ96BN8 352 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 LRIG1Q96JA1 1093 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 OR2A14Q96R47 310 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 SNTG1Q9NSN8 517 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 MARK1Q9P0L2 795 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 H0YIV9 168 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 TNFRSF11BO00300 401 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 ERI3O43414 337 aaKnown RBP13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 FRS3O43559 492 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 TYRP1P17643 537 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 MAOBP27338 520 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 DCDC1P59894 354 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 NPRL3Q12980 569 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 CSTF3Q12996 717 aaKnown RBP13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 FXNQ16595 210 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 MPEG1Q2M385 716 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 GLCCI1Q86VQ1 547 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 CHTF18Q8WVB6 975 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 APH1BQ8WW43 257 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 TESCQ96BS2 214 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 COQ8BQ96D53 544 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 CCDC3Q9BQI4 270 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 MKLN1Q9UL63 735 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 A0A1W2PQ09 198 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 CCDC182A6NF36 153 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 UBL4AP11441 157 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 LAMP2P13473 410 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 GPR50Q13585 617 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 PXDC1Q5TGL8 231 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 ANKRD54Q6NXT1 300 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 SLC46A3Q7Z3Q1 461 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 KRT78Q8N1N4 520 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 GRPEL2Q8TAA5 225 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 PCNPQ8WW12 178 aaKnown RBP13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 LCN9Q8WX39 176 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 IL4I1Q96RQ9 567 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 UCK2Q9BZX2 261 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 ANKHQ9HCJ1 492 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 GPATCH2Q9NW75 528 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 SPHK1Q9NYA1 384 aa13.71□□□□□ -0.21
SHROOM1-208ENST00000617339 PLPP1O14494 284 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 CAPN5O15484 640 aaPredicted RBP13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 NDUFS4O43181 175 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 ARHGEF9O43307 516 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 TNFRSF21O75509 655 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 IGFBP1P08833 259 aaPredicted RBP13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 KELP23276 732 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 RFX2P48378 723 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 CDK6Q00534 326 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 DUSP7Q16829 419 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 BTBD16Q32M84 506 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 OR5M11Q96RB7 305 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 EFCAB11Q9BUY7 163 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 GDE1Q9NZC3 331 aa13.71□□□□□ -0.22
SHROOM1-208ENST00000617339 TRBV5-3A0A0A0MS03 114 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 FAM220BPB1ANY3 271 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 DDOSTP39656 456 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 ASMTP46597 345 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 HOXC5Q00444 222 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 DUSP6Q16828 381 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 SPIN4Q56A73 249 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 SLC5A8Q8N695 610 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 GGHQ92820 318 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 REPS1Q96D71 796 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 BBS4Q96RK4 519 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 DPH7Q9BTV6 452 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 NLNQ9BYT8 704 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 SLA2Q9H6Q3 261 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 NARFLQ9H6Q4 476 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 FAM120CQ9NX05 1096 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 SLC6A14Q9UN76 642 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 PCDH17O14917 1159 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 LILRB5O75023 590 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 SLITRK5O94991 958 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 APOL3O95236 402 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 PAPLNO95428 1278 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 PIK3CBP42338 1070 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 RAB25P57735 213 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 PPP2CBP62714 309 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 PPP2CAP67775 309 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 FCHO2Q0JRZ9 810 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 ST3GAL4Q11206 333 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 GGTA1PQ4G0N0 100 aa13.7□□□□□ -0.22
SHROOM1-208ENST00000617339 GPAT3Q53EU6 434 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms