RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GALNT12Q8IXK2 581 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 PLD6Q8N2A8 252 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 ZNF615Q8N8J6 731 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 OR4K14Q8NGD5 310 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 SPPL2AQ8TCT8 520 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 ADIPOR1Q96A54 375 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 RILPQ96NA2 401 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 SERPINI1Q99574 410 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 FOXC2Q99958 501 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 TMUB1Q9BVT8 246 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 OR10A5Q9H207 317 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 EPB41L4BQ9H329 900 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 RASSF1Q9NS23 344 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 SLC6A5Q9Y345 797 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 NF1P21359 2839 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 FAM221AA4D161 298 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 IL2RAP01589 272 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 ALDOAP04075 364 aaKnown RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 HPNP05981 417 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 KLK1P06870 262 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 S1PR1P21453 382 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 CASQ1P31415 396 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 TIMP3P35625 211 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 PEX19P40855 299 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 CASP3P42574 277 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 MASP1P48740 699 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 ASCL1P50553 236 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 CDK9P50750 372 aaKnown RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 CCNG1P51959 295 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 NRG3P56975 720 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 ACSF3Q4G176 576 aaPredicted RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 VASNQ6EMK4 673 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 METTL2BQ6P1Q9 378 aaKnown RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 POMZP3Q6PJE2 187 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 PRR22Q8IZ63 422 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 PTGR2Q8N8N7 351 aaPredicted RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 OR52B6Q8NGF0 335 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 NINJ1Q92982 152 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 RNASE6Q93091 150 aaKnown RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 PHF21BQ96EK2 531 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 LRRC46Q96FV0 321 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 SECISBP2Q96T21 854 aaKnown RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 SH3GL2Q99962 352 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 VPS11Q9H270 941 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 CXXC4Q9H2H0 198 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 CLEC4MQ9H2X3 399 aaPredicted RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 UBQLN3Q9H347 655 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 ZNF629Q9UEG4 869 aaPredicted RBP12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 ST6GALNAC2Q9UJ37 374 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 CAMK2AQ9UQM7 478 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 IKBKGQ9Y6K9 419 aa12.25□□□□□ -0.45
POLR2J3-219ENST00000608621 GNB5O14775 395 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 KRT38O76015 456 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 SEMA3DO95025 777 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 CPMP14384 443 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 PORP16435 677 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 BMP7P18075 431 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 NT5EP21589 574 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 TMED10P49755 219 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 ZNF136P52737 540 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 RPP38P78345 283 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 SLC7A5Q01650 507 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 TOMM20Q15388 145 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 SF3B4Q15427 424 aaKnown RBP eCLIP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 CEBPEQ15744 281 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 FLYWCH1Q4VC44 716 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 EIPR1Q53HC9 387 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 TECRLQ5HYJ1 363 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 WIPI1Q5MNZ9 446 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 CCNYL2Q5T2Q4 361 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 FRG2Q64ET8 278 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 TTC19Q6DKK2 380 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 FAM111BQ6SJ93 734 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 CDC20BQ86Y33 519 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 LACC1Q8IV20 430 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 PM20D2Q8IYS1 436 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 GOT1L1Q8NHS2 421 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 FRG2BQ96QU4 278 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 NTMT1Q9BV86 223 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 MRPL1Q9BYD6 325 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 PRDM14Q9GZV8 571 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 NXF5Q9H1B4 397 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 ZBTB26Q9HCK0 441 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 AHSPQ9NZD4 102 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 C15orf41Q9Y2V0 281 aa12.24□□□□□ -0.45
POLR2J3-219ENST00000608621 ABCA4P78363 2273 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 ESYT3A0FGR9 886 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 A6NNC1 897 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 ABCB1P08183 1280 aaPredicted RBP12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 RBP1P09455 135 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 KRT15P19012 456 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 GPX3P22352 226 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 ABCD3P28288 659 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 SERPINB8P50452 374 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 AGFG1P52594 562 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 IFT88Q13099 833 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 FBXL19-AS1Q494R0 122 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 SGO1Q5FBB7 561 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 NHSL2Q5HYW2 709 aa12.23□□□□□ -0.45
POLR2J3-219ENST00000608621 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms