RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NCKAP5O14513 1909 aa15.58■□□□□ 0.09
PNKP-210ENST00000597965 A0A087X1B8 175 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 A0A0A6YYD5 115 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 FAM187AA6NFU0 413 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 UBXN8O00124 270 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 FOXE1O00358 373 aaPredicted RBP15.58■□□□□ 0.08
PNKP-210ENST00000597965 GFAPP14136 432 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 DRD2P14416 443 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 TACR1P25103 407 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 CTSSP25774 331 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 STX2P32856 288 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 RPS13P62277 151 aaKnown RBP15.58■□□□□ 0.08
PNKP-210ENST00000597965 CAV1Q03135 178 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 FOXD4Q12950 439 aaPredicted RBP15.58■□□□□ 0.08
PNKP-210ENST00000597965 SNTB1Q13884 538 aaKnown RBP15.58■□□□□ 0.08
PNKP-210ENST00000597965 SETDB1Q15047 1291 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 TOMM20Q15388 145 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 MRM1Q6IN84 353 aaKnown RBP15.58■□□□□ 0.08
PNKP-210ENST00000597965 KLC3Q6P597 504 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 OR7G1Q8NGA0 311 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 SPPL2AQ8TCT8 520 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 TMEM41AQ96HV5 264 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 ZFP3Q96NJ6 502 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 ERP44Q9BS26 406 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 LIME1Q9H400 295 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 CAMK2AQ9UQM7 478 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 C15orf41Q9Y2V0 281 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 ASB4Q9Y574 426 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 FREM3P0C091 2139 aa15.58■□□□□ 0.08
PNKP-210ENST00000597965 MBD3L4A6NDZ8 208 aaPredicted RBP15.57■□□□□ 0.08
PNKP-210ENST00000597965 MBD3L3A6NE82 208 aaPredicted RBP15.57■□□□□ 0.08
PNKP-210ENST00000597965 MBD3L5A6NJ08 208 aaPredicted RBP15.57■□□□□ 0.08
PNKP-210ENST00000597965 SEMA3DO95025 777 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 ACTL6AO96019 429 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 NAGAP17050 411 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 ALDH18A1P54886 795 aaKnown RBP15.57■□□□□ 0.08
PNKP-210ENST00000597965 EEF1A1P68104 462 aaKnown RBP15.57■□□□□ 0.08
PNKP-210ENST00000597965 ACAP2Q15057 778 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 EEF1A1P5Q5VTE0 462 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 PPM1NQ8N819 430 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 ZNF441Q8N8Z8 693 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 NAXEQ8NCW5 288 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 MBD3L2Q8NHZ7 208 aaPredicted RBP15.57■□□□□ 0.08
PNKP-210ENST00000597965 TRIB1Q96RU8 372 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 SERPINI1Q99574 410 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 UBQLN3Q9H347 655 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 CXorf21Q9HAI6 301 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 TEX10Q9NXF1 929 aaPredicted RBP15.57■□□□□ 0.08
PNKP-210ENST00000597965 AHSPQ9NZD4 102 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 FETUBQ9UGM5 382 aa15.57■□□□□ 0.08
PNKP-210ENST00000597965 ABCA2Q9BZC7 2435 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 A0A1W2PR48 441 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 GLOD5A6NK44 160 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 DYNC1I1O14576 645 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 GUCY1B2O75343 617 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ERN1O75460 977 aaKnown RBP15.56■□□□□ 0.08
PNKP-210ENST00000597965 PRKRAO75569 313 aaKnown RBP15.56■□□□□ 0.08
PNKP-210ENST00000597965 ACSL3O95573 720 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 AIFM1O95831 613 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 HOXB4P17483 251 aaPredicted RBP15.56■□□□□ 0.08
PNKP-210ENST00000597965 BSGP35613 385 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 CASP3P42574 277 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ZNF136P52737 540 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 FBXW4P57775 412 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ADAM8P78325 824 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 FUT7Q11130 342 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 PCBP2Q15366 365 aaKnown RBP eCLIP15.56■□□□□ 0.08
PNKP-210ENST00000597965 CPSF6Q16630 551 aaKnown RBP eCLIP15.56■□□□□ 0.08
PNKP-210ENST00000597965 PFKFB4Q16877 469 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 DEFB113Q30KQ7 82 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 KBTBD12Q3ZCT8 623 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 PAGE2Q7Z2X7 111 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 BIVMQ86UB2 503 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 LRRN4CLQ8ND94 238 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 OR4K14Q8NGD5 310 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 OR1J4Q8NGS1 313 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ZPLD1Q8TCW7 415 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ABTB1Q969K4 478 aaPredicted RBP15.56■□□□□ 0.08
PNKP-210ENST00000597965 GNRHR2Q96P88 292 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 YIPF4Q9BSR8 244 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ZNF717Q9BY31 904 aaPredicted RBP15.56■□□□□ 0.08
PNKP-210ENST00000597965 OR10A5Q9H207 317 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ACBD3Q9H3P7 528 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 IPPKQ9H8X2 491 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ADAM29Q9UKF5 820 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 MPDZO75970 2070 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 ACANP16112 2415 aa15.56■□□□□ 0.08
PNKP-210ENST00000597965 EEF1E1-BLOC1S5C9J1V9 151 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 EEF1E1O43324 174 aaKnown RBP15.55■□□□□ 0.08
PNKP-210ENST00000597965 TMPRSS11DO60235 418 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 EEDO75530 441 aaKnown RBP15.55■□□□□ 0.08
PNKP-210ENST00000597965 RHOXF2BP0C7M4 288 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 CYP4B1P13584 511 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 SSTR4P31391 388 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 SNTA1Q13424 505 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 GTF2H2Q13888 395 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 WHAMMP3Q1A5X7 153 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 TIGD3Q6B0B8 471 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 SLC30A6Q6NXT4 461 aa15.55■□□□□ 0.08
PNKP-210ENST00000597965 GTF2H2CQ6P1K8 395 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms