RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 UBLCP1Q8WVY7 318 aaPredicted RBP13.87□□□□□ -0.19
LIG1-215ENST00000597901 SDCCAG3Q96C92 435 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 CCDC126Q96EE4 140 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 ZNF681Q96N22 645 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 FAIM2Q9BWQ8 316 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 TP63Q9H3D4 680 aaPredicted RBP13.87□□□□□ -0.19
LIG1-215ENST00000597901 GSTO2Q9H4Y5 243 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 ZFP64Q9NPA5 681 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 HEY2Q9UBP5 337 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 CNOT11Q9UKZ1 510 aaKnown RBP13.87□□□□□ -0.19
LIG1-215ENST00000597901 GRID1Q9ULK0 1009 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 STK38LQ9Y2H1 464 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 NPFFR2Q9Y5X5 522 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 NOTCH2Q04721 2471 aa13.87□□□□□ -0.19
LIG1-215ENST00000597901 ANKRD33BA6NCL7 494 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 OR14I1A6ND48 311 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 GOLGA6L10A6NI86 522 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 C19orf84I3L1E1 186 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 UBFD1O14562 309 aaKnown RBP13.86□□□□□ -0.19
LIG1-215ENST00000597901 TP53I11O14683 189 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 SUSD5O60279 629 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 GLRA3O75311 464 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 ESRRBO95718 433 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 ATP1B1P05026 303 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 ENO1P06733 434 aaKnown RBP13.86□□□□□ -0.19
LIG1-215ENST00000597901 RFPL3SP0C7P2 107 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 KRT15P19012 456 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 TNFRSF8P28908 595 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 CRHR1P34998 444 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 SOX18P35713 384 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 ALDH9A1P49189 494 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 HTR6P50406 440 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 FBXW4P57775 412 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 RAE1P78406 368 aaKnown RBP13.86□□□□□ -0.19
LIG1-215ENST00000597901 DUSP2Q05923 314 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 C6orf163Q5TEZ5 329 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 FAM180BQ6P0A1 224 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 SCIMPQ6UWF3 145 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 TDRPQ86YL5 185 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 MCEMP1Q8IX19 187 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 MARVELD2Q8N4S9 558 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 ADCY4Q8NFM4 1077 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 OR5M9Q8NGP3 310 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 APIPQ96GX9 242 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 KCNA7Q96RP8 456 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 SMC6Q96SB8 1091 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 ACPTQ9BZG2 426 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 BRINP2Q9C0B6 783 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 MID1IP1Q9NPA3 183 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 PNPLA3Q9NST1 481 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 COQ3Q9NZJ6 369 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 MAT2BQ9NZL9 334 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 BCAP29Q9UHQ4 241 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 ZNF639Q9UID6 485 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 DLGAP4Q9Y2H0 992 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 LIPGQ9Y5X9 500 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 ZNF780BQ9Y6R6 833 aa13.86□□□□□ -0.19
LIG1-215ENST00000597901 SERTM1A2A2V5 107 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 CCDC151A5D8V7 595 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 AQP7O14520 342 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 BCKDKO14874 412 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 LRATO95237 230 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 PROCP04070 461 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 SNRPB2P08579 225 aaKnown RBP13.85□□□□□ -0.19
LIG1-215ENST00000597901 MYL2P10916 166 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 DRD2P14416 443 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 KIR3DL1P43629 444 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 MAN2A2P49641 1150 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 NAGLUP54802 743 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 NRG3P56975 720 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 HMGCS1Q01581 520 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 BTKQ06187 659 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 PMPCAQ10713 525 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 TRMT12Q53H54 448 aaKnown RBP13.85□□□□□ -0.19
LIG1-215ENST00000597901 ZNF585AQ6P3V2 769 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 CCDC116Q8IYX3 515 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 VWA5B2Q8N398 1253 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 RPRMLQ8N4K4 120 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 SIMC1Q8NDZ2 872 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 C17orf47Q8NEP4 570 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 SPPL2AQ8TCT8 520 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 CA5BP1Q8WTZ4 195 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.85□□□□□ -0.19
LIG1-215ENST00000597901 DIO2Q92813 273 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 CTHRC1Q96CG8 243 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 KLHL29Q96CT2 875 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 CNRIP1Q96F85 164 aaPredicted RBP13.85□□□□□ -0.19
LIG1-215ENST00000597901 LDAHQ9H6V9 325 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 PPCSQ9HAB8 311 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 TNFRSF10DQ9UBN6 386 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 UTS2RQ9UKP6 389 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 ACAD8Q9UKU7 415 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 BOKQ9UMX3 212 aaPredicted RBP13.85□□□□□ -0.19
LIG1-215ENST00000597901 CFL2Q9Y281 166 aa13.85□□□□□ -0.19
LIG1-215ENST00000597901 TRGV5A0A0B4J1U4 118 aa13.84□□□□□ -0.19
LIG1-215ENST00000597901 GNG14A0A1W2PPG7 69 aa13.84□□□□□ -0.19
LIG1-215ENST00000597901 LRRC3CA6NJW4 275 aa13.84□□□□□ -0.19
LIG1-215ENST00000597901 SMIM23A6NLE4 172 aa13.84□□□□□ -0.19
LIG1-215ENST00000597901 PCDH7O60245 1069 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms