RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CT62P0C5K7 136 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 FAM58BPP0C7Q3 252 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 TMIGD3P0DMS9 266 aaPredicted RBP9.09□□□□□ -0.95
LIG1-209ENST00000596104 NR2F6P10588 404 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 CPN1P15169 458 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 PTPN6P29350 595 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 SSTR1P30872 391 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 BSGP35613 385 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 MASP1P48740 699 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 TMED10P49755 219 aaKnown RBP9.09□□□□□ -0.95
LIG1-209ENST00000596104 RAP1GDS1P52306 607 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 RPS13P62277 151 aaKnown RBP9.09□□□□□ -0.95
LIG1-209ENST00000596104 DR1Q01658 176 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 FUT7Q11130 342 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 DLG1Q12959 904 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 CAPN12Q6ZSI9 719 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 ADGRE4PQ86SQ3 457 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 ISCA2Q86U28 154 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 YRDCQ86U90 279 aaKnown RBP9.09□□□□□ -0.95
LIG1-209ENST00000596104 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 KLHL7Q8IXQ5 586 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 CIARTQ8N365 385 aaPredicted RBP9.09□□□□□ -0.95
LIG1-209ENST00000596104 STAG3L4Q8TBR4 150 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 ISL2Q96A47 359 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 MTERF1Q99551 399 aaKnown RBP9.09□□□□□ -0.95
LIG1-209ENST00000596104 CENPKQ9BS16 269 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 RBM24Q9BX46 236 aaKnown RBP9.09□□□□□ -0.95
LIG1-209ENST00000596104 ALG9Q9H6U8 611 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 LYARQ9NX58 379 aaKnown RBP9.09□□□□□ -0.95
LIG1-209ENST00000596104 GALNT8Q9NY28 637 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 OPTCQ9UBM4 332 aa9.09□□□□□ -0.95
LIG1-209ENST00000596104 NCKAP5O14513 1909 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 SH3D21A4FU49 640 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 FAM171A2A8MVW0 826 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 KIAA1324LA8MWY0 1029 aaPredicted RBP9.08□□□□□ -0.96
LIG1-209ENST00000596104 UBXN8O00124 270 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 GNB5O14775 395 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 PGRMC2O15173 223 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 RCBTB2O95199 551 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 ACTL6AO96019 429 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 ABCB1P08183 1280 aaPredicted RBP9.08□□□□□ -0.96
LIG1-209ENST00000596104 CYP4B1P13584 511 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 MTHFD2P13995 350 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 ABCD3P28288 659 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 GP5P40197 560 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 PTGDSP41222 190 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 RAB10P61026 200 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 RCAN2Q14206 197 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 DESI1Q6ICB0 168 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 TMEM81Q6P7N7 255 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 TAOK1Q7L7X3 1001 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 GALNT12Q8IXK2 581 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 ZBED8Q8IZ13 594 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 PRR22Q8IZ63 422 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 FAM83FQ8NEG4 500 aaPredicted RBP9.08□□□□□ -0.96
LIG1-209ENST00000596104 C17orf47Q8NEP4 570 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 SLC44A1Q8WWI5 657 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 ZFP3Q96NJ6 502 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 UCN2Q96RP3 112 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 MDFIQ99750 246 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 PIP5K1AQ99755 562 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 CPNE1Q99829 537 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 TUBA1CQ9BQE3 449 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 G6PC3Q9BUM1 346 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 SFXN3Q9BWM7 321 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 TRIM31Q9BZY9 425 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 NXF5Q9H1B4 397 aaKnown RBP9.08□□□□□ -0.96
LIG1-209ENST00000596104 ZNF395Q9H8N7 513 aaPredicted RBP9.08□□□□□ -0.96
LIG1-209ENST00000596104 PRM3Q9NNZ6 103 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 PCDHGA11Q9Y5H2 935 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 VPS13CQ709C8 3753 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 KIAA1549Q9HCM3 1950 aa9.08□□□□□ -0.96
LIG1-209ENST00000596104 ARHGAP21Q5T5U3 1957 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 TCRBV9S1A1TA0A576 114 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 FAM159BA6NKW6 160 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 A8MXE2 369 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 SUPT3HB4E1H0 165 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 H0YIV9 168 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 SNPHO15079 494 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 SIAH2O43255 324 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 ARHGEF9O43307 516 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 KERAO60938 352 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 CDH16O75309 829 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 ERN1O75460 977 aaKnown RBP9.07□□□□□ -0.96
LIG1-209ENST00000596104 SUPT3HO75486 399 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 EPB42P16452 691 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 NAGAP17050 411 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 TCP1P17987 556 aaKnown RBP9.07□□□□□ -0.96
LIG1-209ENST00000596104 S1PR1P21453 382 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 GPX3P22352 226 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 PTX3P26022 381 aaPredicted RBP9.07□□□□□ -0.96
LIG1-209ENST00000596104 NRG3P56975 720 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 RPP38P78345 283 aaKnown RBP9.07□□□□□ -0.96
LIG1-209ENST00000596104 CUL3Q13618 768 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 SETDB1Q15047 1291 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 TOMM20Q15388 145 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 Q5PR19 223 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 LIPJQ5W064 366 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 HLA-DQA1Q5Y7H0 255 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 OR52E8Q6IFG1 317 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms