RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MAELQ96JY0 434 aaKnown RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 ZNF597Q96LX8 424 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 LPAR4Q99677 370 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 WDR77Q9BQA1 342 aaPredicted RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 GRIP2Q9C0E4 1043 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 WDR55Q9H6Y2 383 aaPredicted RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 RPF2Q9H7B2 306 aaKnown RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 GPR83Q9NYM4 423 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 SUCOQ9UBS9 1254 aaKnown RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 TRAF6Q9Y4K3 522 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 CEPT1Q9Y6K0 416 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 SYNDIG1LA6NDD5 238 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 ZNF26P17031 533 aaPredicted RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 ALDH3B2P48448 385 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 MAPK12P53778 367 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 RAPSNQ13702 412 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 SOWAHCQ53LP3 525 aaPredicted RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 SPIN4Q56A73 249 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 C18orf63Q68DL7 685 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 TCTN3Q6NUS6 607 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 PAPD4Q6PIY7 484 aaKnown RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 TANKQ92844 425 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 ASB9Q96DX5 294 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 PRPF18Q99633 342 aaKnown RBP18.35■□□□□ 0.53
LSM4-203ENST00000593829 LHPPQ9H008 270 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 SLC25A18Q9H1K4 315 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 CLDN16Q9Y5I7 305 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 SCN2AQ99250 2005 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 FAM208BQ5VWN6 2430 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 MED13Q9UHV7 2174 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 A0A1W2PR48 441 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 SERPINA7P05543 415 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 CDH2P19022 906 aaPredicted RBP18.34■□□□□ 0.53
LSM4-203ENST00000593829 ACSM2AQ08AH3 577 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 STX4Q12846 297 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 ART3Q13508 389 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 ACSM2BQ68CK6 577 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 RNF165Q6ZSG1 346 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 MIPOL1Q8TD10 442 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 THOC3Q96J01 351 aaKnown RBP18.34■□□□□ 0.53
LSM4-203ENST00000593829 NUDT9Q9BW91 350 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 PCDHGB4Q9UN71 923 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 PCDHGB5Q9Y5G0 923 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 DNAJC15Q9Y5T4 150 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 PIEZO2Q9H5I5 2752 aa18.34■□□□□ 0.53
LSM4-203ENST00000593829 TGFBR3LH3BV60 316 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 GUCY1B2O75343 617 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 PRR35P0CG20 571 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 NR2F6P10588 404 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 PGDP52209 483 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 TUBA4AP68366 448 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 DCTN2Q13561 401 aaKnown RBP18.33■□□□□ 0.53
LSM4-203ENST00000593829 EXT1Q16394 746 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 C6orf52Q5T4I8 152 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 PLAG1Q6DJT9 500 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 C7orf57Q8NEG2 295 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 APIPQ96GX9 242 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 OSBPL11Q9BXB4 747 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 SEMA4CQ9C0C4 833 aa18.33■□□□□ 0.53
LSM4-203ENST00000593829 CHCHD3Q9NX63 227 aaKnown RBP18.33■□□□□ 0.53
LSM4-203ENST00000593829 TMEM233B4DJY2 109 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 SLC28A1O00337 649 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 LDB3O75112 727 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 TRMUO75648 421 aaKnown RBP18.33■□□□□ 0.52
LSM4-203ENST00000593829 RSL1D1O76021 490 aaKnown RBP18.33■□□□□ 0.52
LSM4-203ENST00000593829 AIFM1O95831 613 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 EPHA3P29320 983 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 PPP2R1BP30154 601 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 TRAP1Q12931 704 aaKnown RBP18.33■□□□□ 0.52
LSM4-203ENST00000593829 SERTAD2Q14140 314 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 BTBD16Q32M84 506 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 ERI1Q8IV48 349 aaKnown RBP18.33■□□□□ 0.52
LSM4-203ENST00000593829 AGR3Q8TD06 166 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 ANKRD9Q96BM1 317 aaPredicted RBP18.33■□□□□ 0.52
LSM4-203ENST00000593829 ALOXE3Q9BYJ1 711 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 ZNF71Q9NQZ8 489 aaPredicted RBP18.33■□□□□ 0.52
LSM4-203ENST00000593829 PNO1Q9NRX1 252 aaKnown RBP18.33■□□□□ 0.52
LSM4-203ENST00000593829 TEX10Q9NXF1 929 aaPredicted RBP18.33■□□□□ 0.52
LSM4-203ENST00000593829 ZDHHC2Q9UIJ5 367 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 TP53TG5Q9Y2B4 290 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 PCDHGB7Q9Y5F8 929 aa18.33■□□□□ 0.52
LSM4-203ENST00000593829 HNRNPRO43390 633 aaKnown RBP18.32■□□□□ 0.52
LSM4-203ENST00000593829 PRKRAO75569 313 aaKnown RBP18.32■□□□□ 0.52
LSM4-203ENST00000593829 ALPPP05187 535 aa18.32■□□□□ 0.52
LSM4-203ENST00000593829 CD1EP15812 388 aa18.32■□□□□ 0.52
LSM4-203ENST00000593829 CDK9P50750 372 aaKnown RBP18.32■□□□□ 0.52
LSM4-203ENST00000593829 TRA2BP62995 288 aaKnown RBP18.32■□□□□ 0.52
LSM4-203ENST00000593829 UGT3A2Q3SY77 523 aa18.32■□□□□ 0.52
LSM4-203ENST00000593829 NDUFAF5Q5TEU4 345 aa18.32■□□□□ 0.52
LSM4-203ENST00000593829 DHRS4L2Q6PKH6 230 aa18.32■□□□□ 0.52
LSM4-203ENST00000593829 CARM1Q86X55 608 aa18.32■□□□□ 0.52
LSM4-203ENST00000593829 M1APQ8TC57 530 aa18.32■□□□□ 0.52
LSM4-203ENST00000593829 SMAD5Q99717 465 aaKnown RBP18.32■□□□□ 0.52
LSM4-203ENST00000593829 ZNF552Q9H707 407 aaPredicted RBP18.32■□□□□ 0.52
LSM4-203ENST00000593829 SIRT5Q9NXA8 310 aa18.32■□□□□ 0.52
LSM4-203ENST00000593829 CCDC160A6NGH7 325 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 TRPC5OSA6NMA1 111 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 A8MUA0 341 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 K7EM74 188 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 RGS14O43566 566 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms