RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 MID1O15344 667 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 PROM1O43490 865 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 PRR35P0CG20 571 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 HMGA1P17096 107 aaKnown RBP16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 PSMA3P25788 255 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 NDUFS1P28331 727 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 MNDAP41218 407 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 GCGRP47871 477 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 NTHL1P78549 312 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 TAF13Q15543 124 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 ALG1LQ6GMV1 187 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 GID4Q8IVV7 300 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 CAMKVQ8NCB2 501 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 HSFX1Q9UBD0 423 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 IL20RAQ9UHF4 553 aa16.27■□□□□ 0.19
SMARCA4-215ENST00000590574 CTDSP2O14595 271 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 ZDHHC11BP0C7U3 371 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 GPX2P18283 190 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 CHMP24386 653 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 LIPAP38571 399 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 SLITRK4Q8IW52 837 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 ZNF354BQ96LW1 612 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 ZNF225Q9UK10 706 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 C2orf92A0A1B0GVN3 265 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 ANXA2P2A6NMY6 339 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 AQP9O43315 295 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 PCDHGA12O60330 932 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 ANXA2P07355 339 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 STOMP27105 288 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 PARS2Q7L3T8 475 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 METTL4Q8N3J2 472 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 PELI2Q9HAT8 420 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 ANKRD28O15084 1053 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 CTSAP10619 480 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 IDUAP35475 653 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 NIPSNAP1Q9BPW8 284 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 CENPOQ9BU64 300 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 OR2A25A4D2G3 310 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 ANKRD33BA6NCL7 494 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 UNC119BA6NIH7 251 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 LATO43561 262 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 MRPL58Q14197 206 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 ZNF791Q3KP31 576 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 HORMAD2Q8N7B1 307 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 RFT1Q96AA3 541 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 CNIH4Q9P003 139 aa16.26■□□□□ 0.19
SMARCA4-215ENST00000590574 TRBV4-1A0A0J9YWV2 114 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 A8MU76 341 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 WNT4P56705 351 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 FAM214AQ32MH5 1076 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 LCTLQ6UWM7 567 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 GDPGP1Q6ZNW5 385 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 OR4K14Q8NGD5 310 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 C11orf49Q9H6J7 331 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 GNG8Q9UK08 70 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 LIPT1Q9Y234 373 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 OR1A2Q9Y585 309 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 MCM3APO60318 1980 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 ZNF860A6NHJ4 632 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 F11P03951 625 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 PTGER1P34995 402 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 PRKCDQ05655 676 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 STEAP3Q658P3 488 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 NLGN4XQ8N0W4 816 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 DOK4Q8TEW6 326 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 ZNF431Q8TF32 576 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 AKAP1Q92667 903 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 RGS17Q9UGC6 210 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 HS3ST2Q9Y278 367 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 PADI2Q9Y2J8 665 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 TNFSF8P32971 234 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 AGAP7PQ5VUJ5 663 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 FBXO15Q8NCQ5 510 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 OR2A12Q8NGT7 310 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 DIABLOQ9NR28 239 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 EEF1E1O43324 174 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 GDI1P31150 447 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 SSTR4P31391 388 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 ARFIP1P53367 373 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 GMFBP60983 142 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 SLC35A2P78381 396 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 KCNJ8Q15842 424 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 KLHDC8AQ8IYD2 350 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 ZNF248Q8NDW4 579 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 ANKK1Q8NFD2 765 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 ASB15Q8WXK1 588 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 PCDHGA6Q9Y5G7 932 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 CORINQ9Y5Q5 1042 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 A0A0G2JPF8 293 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 HNRNPCL3B7ZW38 293 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 HNRNPCL4P0DMR1 293 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 PEPDP12955 493 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 CCSMST1Q4G0I0 132 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 XKRXQ6PP77 449 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 SLC46A3Q7Z3Q1 461 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 RAB7BQ96AH8 199 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 DTD2Q96FN9 168 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 GINS4Q9BRT9 223 aa16.25■□□□□ 0.19
SMARCA4-215ENST00000590574 MRTO4Q9UKD2 239 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms