RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ZPLD1Q8TCW7 415 aa12.8□□□□□ -0.36
VMP1-209ENST00000588915 WDYHV1Q96HA8 205 aa12.8□□□□□ -0.36
VMP1-209ENST00000588915 RILPQ96NA2 401 aa12.8□□□□□ -0.36
VMP1-209ENST00000588915 ZFP3Q96NJ6 502 aa12.8□□□□□ -0.36
VMP1-209ENST00000588915 ERP44Q9BS26 406 aa12.8□□□□□ -0.36
VMP1-209ENST00000588915 EPB41L4BQ9H329 900 aa12.8□□□□□ -0.36
VMP1-209ENST00000588915 SAYSD1Q9NPB0 183 aa12.8□□□□□ -0.36
VMP1-209ENST00000588915 UBXN8O00124 270 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 SEMA3DO95025 777 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 ATE1O95260 518 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 BMP7P18075 431 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 PIK3CGP48736 1102 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 ALDH18A1P54886 795 aaKnown RBP12.79□□□□□ -0.36
VMP1-209ENST00000588915 FBXW4P57775 412 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 DLG1Q12959 904 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 NAB1Q13506 487 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 KEAP1Q14145 624 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 RCAN2Q14206 197 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 PCBP2Q15366 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
VMP1-209ENST00000588915 FAM83EQ2M2I3 478 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 C10orf62Q5T681 223 aaPredicted RBP12.79□□□□□ -0.36
VMP1-209ENST00000588915 FBXW10Q5XX13 1052 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 TIGD3Q6B0B8 471 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 OR52E8Q6IFG1 317 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 SCIMPQ6UWF3 145 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 CTAGE3PQ8IX95 158 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 GALNT12Q8IXK2 581 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 RNF175Q8N4F7 328 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 ZNF615Q8N8J6 731 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 L3MBTL4Q8NA19 623 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 OR7G1Q8NGA0 311 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 ABTB1Q969K4 478 aaPredicted RBP12.79□□□□□ -0.36
VMP1-209ENST00000588915 ADIPOR1Q96A54 375 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 GNRHR2Q96P88 292 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 UGT2B28Q9BY64 529 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 GSX1Q9H4S2 264 aaPredicted RBP12.79□□□□□ -0.36
VMP1-209ENST00000588915 PLEKHF2Q9H8W4 249 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 ACTR8Q9H981 624 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 TRMT1Q9NXH9 659 aaKnown RBP12.79□□□□□ -0.36
VMP1-209ENST00000588915 CAMK2AQ9UQM7 478 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 CFL2Q9Y281 166 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 ACOT9Q9Y305 439 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 TNPO3Q9Y5L0 923 aaKnown RBP12.79□□□□□ -0.36
VMP1-209ENST00000588915 VPS13CQ709C8 3753 aa12.79□□□□□ -0.36
VMP1-209ENST00000588915 FLNAP21333 2647 aaKnown RBP12.78□□□□□ -0.36
VMP1-209ENST00000588915 HRNRQ86YZ3 2850 aaPredicted RBP12.78□□□□□ -0.36
VMP1-209ENST00000588915 FAM187AA6NFU0 413 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 WASHC1A8K0Z3 465 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 KDM4EB2RXH2 506 aaPredicted RBP12.78□□□□□ -0.36
VMP1-209ENST00000588915 TMPRSS11DO60235 418 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 EEDO75530 441 aaKnown RBP12.78□□□□□ -0.36
VMP1-209ENST00000588915 PRKRAO75569 313 aaKnown RBP12.78□□□□□ -0.36
VMP1-209ENST00000588915 AIFM1O95831 613 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 RHOXF2BP0C7M4 288 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 DRD2P14416 443 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 CPN1P15169 458 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 PIK3R1P27986 724 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 HOXC12P31275 282 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 SSTR4P31391 388 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 GCKP35557 465 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 EEF1A1P68104 462 aaKnown RBP12.78□□□□□ -0.36
VMP1-209ENST00000588915 SNTA1Q13424 505 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 SETDB1Q15047 1291 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 ACAP2Q15057 778 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 EEF1A1P5Q5VTE0 462 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 MYLK4Q86YV6 388 aaPredicted RBP12.78□□□□□ -0.36
VMP1-209ENST00000588915 MMP21Q8N119 569 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 OR4K14Q8NGD5 310 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 OR1J4Q8NGS1 313 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 WDR20Q8TBZ3 569 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 ISL2Q96A47 359 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 NXNL1Q96CM4 212 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 DACH2Q96NX9 599 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 UCN2Q96RP3 112 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 TRIB1Q96RU8 372 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 SERPINI1Q99574 410 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 OR10A5Q9H207 317 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 NEUROD4Q9HD90 331 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 TEX10Q9NXF1 929 aaPredicted RBP12.78□□□□□ -0.36
VMP1-209ENST00000588915 SLC6A5Q9Y345 797 aa12.78□□□□□ -0.36
VMP1-209ENST00000588915 A0A087X1B8 175 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 GLOD5A6NK44 160 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 LRATO95237 230 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 ABCB1P08183 1280 aaPredicted RBP12.77□□□□□ -0.37
VMP1-209ENST00000588915 KRT15P19012 456 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 ABCD3P28288 659 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 PTPN6P29350 595 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 XKP51811 444 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 GPX6P59796 221 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 CAV1Q03135 178 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 CPSF6Q16630 551 aaKnown RBP eCLIP12.77□□□□□ -0.37
VMP1-209ENST00000588915 PFKFB4Q16877 469 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 KBTBD12Q3ZCT8 623 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 C6orf163Q5TEZ5 329 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 BICRALQ6AI39 1079 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 SLC30A6Q6NXT4 461 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 TMEM64Q6YI46 380 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 CMC1Q7Z7K0 106 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 PPM1NQ8N819 430 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms