RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 VPS26BQ4G0F5 336 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 TRMT12Q53H54 448 aaKnown RBP12.69□□□□□ -0.38
VMP1-203ENST00000586245 IRAK1BP1Q5VVH5 260 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 RNF111Q6ZNA4 994 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 CLECL1Q8IZS7 167 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 ZNF721Q8TF20 911 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 TSPEARQ8WU66 669 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 CTHRC1Q96CG8 243 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 ELP4Q96EB1 424 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 ITCHQ96J02 903 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 MAGED4Q96JG8 741 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 SLC25A23Q9BV35 468 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 ING2Q9H160 280 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 MMP25Q9NPA2 562 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 TAS2R9Q9NYW1 312 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 BCAP29Q9UHQ4 241 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 PPIEQ9UNP9 301 aaKnown RBP12.69□□□□□ -0.38
VMP1-203ENST00000586245 SNX8Q9Y5X2 465 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 CELSR3Q9NYQ7 3312 aa12.69□□□□□ -0.38
VMP1-203ENST00000586245 CROCCQ5TZA2 2017 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 A0A087WV62 115 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 TRBV11-1A0A0K0K1C0 115 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 A0A1W2PP18 115 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 OR6C76A6NM76 312 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 MASP2O00187 686 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 HRKO00198 91 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 RFXANKO14593 260 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 ANGPT2O15123 496 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 PLOD3O60568 738 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 PRAMEF2O60811 474 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 SCN2BO60939 215 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 COQ9O75208 318 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 ANP32DO95626 131 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 IGKV3-11P04433 115 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 CAPN3P20807 821 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 ITGA3P26006 1051 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 SSTR4P31391 388 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 MC3RP41968 323 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 HBA1P69905 142 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 PRR5P85299 388 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 MGAT2Q10469 447 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 CHAF1BQ13112 559 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 HSDL2Q6YN16 418 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 SZRD1Q7Z422 152 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 TRIML2Q8N7C3 387 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 OR7G2Q8NG99 324 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 OR52R1Q8NGF1 315 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 ELP5Q8TE02 316 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 APOBEC4Q8WW27 367 aaKnown RBP12.68□□□□□ -0.38
VMP1-203ENST00000586245 THOC3Q96J01 351 aaKnown RBP12.68□□□□□ -0.38
VMP1-203ENST00000586245 CCDC115Q96NT0 180 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 CNTNAP3BQ96NU0 1288 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 PANX1Q96RD7 426 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 NUDT9Q9BW91 350 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 CCDC106Q9BWC9 280 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 DEFB126Q9BYW3 111 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 CNTNAP3Q9BZ76 1288 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 SEMA4CQ9C0C4 833 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 MYLK2Q9H1R3 596 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 OR10A5Q9H207 317 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 ZNF639Q9UID6 485 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 LEF1Q9UJU2 399 aaPredicted RBP12.68□□□□□ -0.38
VMP1-203ENST00000586245 CFL2Q9Y281 166 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 KCNMB2Q9Y691 235 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 CHD8Q9HCK8 2581 aa12.68□□□□□ -0.38
VMP1-203ENST00000586245 ZFHX4Q86UP3 3567 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 EMC8O43402 210 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 ZFAND5O76080 213 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 CBX7O95931 251 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 S1PR1P21453 382 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 TRPC1P48995 793 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 GPR143P51810 404 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 PRKAG1P54619 331 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 SLC37A1P57057 533 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 CBX1P83916 185 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 Q0VFX4 171 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 CYLC2Q14093 348 aaPredicted RBP12.67□□□□□ -0.38
VMP1-203ENST00000586245 EXOSC7Q15024 291 aaKnown RBP12.67□□□□□ -0.38
VMP1-203ENST00000586245 MMEL1Q495T6 779 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 C6orf10Q5SRN2 563 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 JMJD6Q6NYC1 403 aaPredicted RBP12.67□□□□□ -0.38
VMP1-203ENST00000586245 SLC2A7Q6PXP3 512 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 TMEM64Q6YI46 380 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 SLC29A4Q7RTT9 530 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 APLFQ8IW19 511 aaPredicted RBP12.67□□□□□ -0.38
VMP1-203ENST00000586245 OR2L13Q8N349 312 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 ZNF321PQ8N8H1 164 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 NUP43Q8NFH3 380 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 OR5L2Q8NGL0 311 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 RP9Q8TA86 221 aaKnown RBP12.67□□□□□ -0.38
VMP1-203ENST00000586245 PSMA8Q8TAA3 256 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 SFXN5Q8TD22 340 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 SNRNP27Q8WVK2 155 aaKnown RBP12.67□□□□□ -0.38
VMP1-203ENST00000586245 MOAP1Q96BY2 351 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 LHPPQ9H008 270 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 CXorf36Q9H7Y0 433 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 SIRT3Q9NTG7 399 aaPredicted RBP12.67□□□□□ -0.38
VMP1-203ENST00000586245 ZCCHC3Q9NUD5 404 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms