RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ZNF441Q8N8Z8 693 aa20.72■□□□□ 0.91
RBFOX1-219ENST00000569895 FAIM2Q9BWQ8 316 aa20.72■□□□□ 0.91
RBFOX1-219ENST00000569895 MCCC2Q9HCC0 563 aa20.72■□□□□ 0.91
RBFOX1-219ENST00000569895 TRPS1Q9UHF7 1281 aa20.72■□□□□ 0.91
RBFOX1-219ENST00000569895 CNOT11Q9UKZ1 510 aaKnown RBP20.72■□□□□ 0.91
RBFOX1-219ENST00000569895 PCDHGB3Q9Y5G1 929 aa20.72■□□□□ 0.91
RBFOX1-219ENST00000569895 PCDHA9Q9Y5H5 950 aa20.72■□□□□ 0.91
RBFOX1-219ENST00000569895 APCP25054 2843 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 NKX2-6A6NCS4 301 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 TOXO94900 526 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 KRT6AP02538 564 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 KRT6BP04259 564 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 ABHD2P08910 425 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 RFPL3SP0C7P2 107 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 GLI4P10075 376 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 ZFP36L2P47974 494 aaKnown RBP20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 KRT6CP48668 564 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 TRA2BP62995 288 aaKnown RBP20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 CLCQ05315 142 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 SLC48A1Q6P1K1 146 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 LETMD1Q6P1Q0 360 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 PACS2Q86VP3 889 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 IFT20Q8IY31 132 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 ZNF615Q8N8J6 731 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 ZNF597Q96LX8 424 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 PROK2Q9HC23 129 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 FARSBQ9NSD9 589 aaKnown RBP20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 TNFRSF10DQ9UBN6 386 aa20.71■□□□□ 0.91
RBFOX1-219ENST00000569895 PKDREJQ9NTG1 2253 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 CDH16O75309 829 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 SUPT7LO94864 414 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 CT62P0C5K7 136 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 HSD3B1P14060 373 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 CSNK2A2P19784 350 aaPredicted RBP20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 HSD3B2P26439 372 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 HSD17B3P37058 310 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 RASA2Q15283 850 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 C1orf185Q5T7R7 199 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 RPS27LQ71UM5 84 aaKnown RBP20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 CLYBLQ8N0X4 340 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 VWA5B2Q8N398 1253 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 TMEM151AQ8N4L1 468 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 CEP112Q8N8E3 955 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 KIF18AQ8NI77 898 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 NEIL3Q8TAT5 605 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 SPPL2AQ8TCT8 520 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 ADIPOR1Q96A54 375 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 BRINP2Q9C0B6 783 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 VPS29Q9UBQ0 182 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 FAM215AQ9Y5M1 114 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 ABCA12Q86UK0 2595 aa20.7■□□□□ 0.9
RBFOX1-219ENST00000569895 A0A1W2PS29 197 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 LRRC3CA6NJW4 275 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 PPP6CO00743 305 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 TRIM3O75382 744 aaPredicted RBP20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 ERAL1O75616 437 aaKnown RBP20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 ATP1B1P05026 303 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 SBK3P0C264 359 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 IGFBP2P18065 325 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 TSPAN8P19075 237 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 GDF1P27539 372 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 MSX1P28360 303 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 MASP1P48740 699 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 FBXW4P57775 412 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 TFF3Q07654 80 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 GALNT1Q10472 559 aaPredicted RBP20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 MAP4K2Q12851 820 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 RTL6Q6ICC9 239 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 TMEM64Q6YI46 380 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 TM4SF18Q96CE8 201 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 CES1P1Q9UKY3 287 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 NFU1Q9UMS0 254 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 STK38LQ9Y2H1 464 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 ZNF780BQ9Y6R6 833 aa20.69■□□□□ 0.9
RBFOX1-219ENST00000569895 A0A1B0GTL3 188 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 ULK1O75385 1050 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 TRAPPC6AO75865 159 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 OR4F21O95013 312 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 NAGAP17050 411 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 SF3B4Q15427 424 aaKnown RBP eCLIP20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 SLC22A9Q8IVM8 553 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 DMRTC2Q8IXT2 367 aaPredicted RBP20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 CDYL2Q8N8U2 506 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 RILPQ96NA2 401 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 ANGPTL4Q9BY76 406 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 NPDC1Q9NQX5 325 aaPredicted RBP20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 SPRR3Q9UBC9 169 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 BCAP29Q9UHQ4 241 aa20.68■□□□□ 0.9
RBFOX1-219ENST00000569895 A0A0G2JNJ9 132 aa20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 AHRRA9YTQ3 701 aa20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 MANBAO00462 879 aa20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 LRATO95237 230 aa20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 ESRRBO95718 433 aa20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 IMPDH1P20839 514 aa20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 ENDOUP21128 410 aaKnown RBP20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 S1PR1P21453 382 aa20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 ATP5F1P24539 256 aaPredicted RBP20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 FEN1P39748 380 aaKnown RBP20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 TRPC1P48995 793 aa20.67■□□□□ 0.9
RBFOX1-219ENST00000569895 ALDH9A1P49189 494 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms