RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 FAM90A26D6RGX4 464 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 PPIAL4DF5H284 164 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 NPIPA3F8WFD2 350 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 KLF11O14901 512 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 LSM1O15116 133 aaKnown RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 ARPC3O15145 178 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 YKT6O15498 198 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 FCMRO60667 390 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 GRAP2O75791 330 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 IVLP07476 585 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 ALPIP09923 528 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 CEACAM1P13688 526 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 F3P13726 295 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 FOSL2P15408 326 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 MX1P20591 662 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 PCMT1P22061 227 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 UGT1A1P22309 533 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 UQCRC2P22695 453 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 CHMLP26374 656 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 TMPOP42166 694 aaKnown RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 MAGEA11P43364 429 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 SLC8A3P57103 927 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 MAT1AQ00266 395 aaKnown RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 PJVKQ0ZLH3 352 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 Q3ZCU0 254 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 ARMCX4Q5H9R4 360 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 ELFN2Q5R3F8 820 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 LRRC66Q68CR7 880 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 PDPK2PQ6A1A2 396 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 ERICH5Q6P6B1 374 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 CTR9Q6PD62 1173 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 YRDCQ86U90 279 aaKnown RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 COMTD1Q86VU5 262 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 KMT5CQ86Y97 462 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 TDHQ8IZJ6 230 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 SYCE1Q8N0S2 351 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 LRRC75A-AS1Q8N1F1 130 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 ANKFN1Q8N957 763 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 OR4K1Q8NGD4 311 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 CCDC107Q8WV48 283 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 SLC44A1Q8WWI5 657 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 HPDLQ96IR7 371 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 FAM71F1Q96KD3 344 aaPredicted RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 PANX1Q96RD7 426 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 NPY6RQ99463 290 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 PRMT1Q99873 361 aaKnown RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 KXD1Q9BQD3 176 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 UBAC1Q9BSL1 405 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 ALKBH7Q9BT30 221 aaPredicted RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 ROPN1BQ9BZX4 212 aaPredicted RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 RIMS4Q9H426 269 aaPredicted RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 MARCH7Q9H992 704 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 CYP3A43Q9HB55 503 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 HACD3Q9P035 362 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 B9D1Q9UPM9 204 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 SPIN1Q9Y657 262 aaPredicted RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 ZHX2Q9Y6X8 837 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 KANK1Q14678 1352 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 CACNA1FO60840 1977 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 TRAV18A0A075B6X5 111 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 IGKV6D-41A0A0C4DH26 115 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 OR6C74A6NCV1 312 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 NPIPA2E9PIF3 369 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 K7ERQ8 282 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 FOXE1O00358 373 aaPredicted RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 SDHDO14521 159 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 DVL1O14640 695 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 CHEK1O14757 476 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 ZNF254O75437 659 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 SAP30O75446 220 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 KRT19P08727 400 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 GSTA2P09210 222 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 DBTP11182 482 aaKnown RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 ITGA2P17301 1181 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 CYP3A5P20815 502 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 ANXA13P27216 316 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 FDFT1P37268 417 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 MNDAP41218 407 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 SLC6A8P48029 635 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 ACADVLP49748 655 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 PPT1P50897 306 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 LIMK2P53671 638 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 DVL1P1P54792 670 aaPredicted RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 CLDN20P56880 219 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 DSCR10P59022 87 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 NFATC2Q13469 925 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 CA9Q16790 459 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 PCK2Q16822 640 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 HKDC1Q2TB90 917 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 KLHL40Q2TBA0 621 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 LIN9Q5TKA1 542 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 AP1ARQ63HQ0 302 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 HIST2H2AA3Q6FI13 130 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 ZNF852Q6ZMS4 543 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 TRPM8Q7Z2W7 1104 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 LHFPL4Q7Z7J7 247 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 PAQR7Q86WK9 346 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 VSTM4Q8IW00 320 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 CHERPQ8IWX8 916 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms