RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 PACS2Q86VP3 889 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 CLYBLQ8N0X4 340 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 CEP112Q8N8E3 955 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 KIF18AQ8NI77 898 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 SECISBP2Q96T21 854 aaKnown RBP15.29■□□□□ 0.04
CDR2-207ENST00000569045 TTYH2Q9BSA4 534 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 ZNF703Q9H7S9 590 aaPredicted RBP15.29■□□□□ 0.04
CDR2-207ENST00000569045 ACKR4Q9NPB9 350 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 TRPS1Q9UHF7 1281 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 STK38LQ9Y2H1 464 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 NPFFR2Q9Y5X5 522 aa15.29■□□□□ 0.04
CDR2-207ENST00000569045 PHF3Q92576 2039 aaKnown RBP15.29■□□□□ 0.04
CDR2-207ENST00000569045 PDZD2O15018 2839 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 CCDC151A5D8V7 595 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 NKX2-6A6NCS4 301 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 CDH16O75309 829 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 ERAL1O75616 437 aaKnown RBP15.28■□□□□ 0.04
CDR2-207ENST00000569045 SUPT7LO94864 414 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 SNX4O95219 450 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 ESRRBO95718 433 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 PDYNP01213 254 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 CSNK2A2P19784 350 aaPredicted RBP15.28■□□□□ 0.04
CDR2-207ENST00000569045 GDF1P27539 372 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 ECHS1P30084 290 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 ZFP36L2P47974 494 aaKnown RBP15.28■□□□□ 0.04
CDR2-207ENST00000569045 MASP1P48740 699 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 CDH13P55290 713 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 CLCQ05315 142 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 RASA2Q15283 850 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 C1orf185Q5T7R7 199 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 SLC48A1Q6P1K1 146 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 LRRC25Q8N386 305 aaPredicted RBP15.28■□□□□ 0.04
CDR2-207ENST00000569045 VWA5B2Q8N398 1253 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 RPRMLQ8N4K4 120 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 C17orf47Q8NEP4 570 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 UCN3Q969E3 161 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 C1QTNF3Q9BXJ4 246 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 BRINP2Q9C0B6 783 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 MCCC2Q9HCC0 563 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 VPS29Q9UBQ0 182 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 BCAP29Q9UHQ4 241 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 CNOT11Q9UKZ1 510 aaKnown RBP15.28■□□□□ 0.04
CDR2-207ENST00000569045 NFU1Q9UMS0 254 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 PCDHA9Q9Y5H5 950 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 ZNF780BQ9Y6R6 833 aa15.28■□□□□ 0.04
CDR2-207ENST00000569045 TRAPPC6AO75865 159 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 CLPSP04118 112 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 GLI4P10075 376 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 HSD3B1P14060 373 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 TSPAN8P19075 237 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 HSD3B2P26439 372 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 HSD17B3P37058 310 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 FBXW4P57775 412 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 TRA2BP62995 288 aaKnown RBP15.27■□□□□ 0.04
CDR2-207ENST00000569045 SF3B4Q15427 424 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDR2-207ENST00000569045 LETMD1Q6P1Q0 360 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 ADGRD1Q6QNK2 874 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 TIFABQ6ZNK6 161 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 SLC22A9Q8IVM8 553 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 ZNF615Q8N8J6 731 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 ZNF441Q8N8Z8 693 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 NEIL3Q8TAT5 605 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 KLHL29Q96CT2 875 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 UCK2Q9BZX2 261 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 FARSBQ9NSD9 589 aaKnown RBP15.27■□□□□ 0.04
CDR2-207ENST00000569045 TNFRSF10DQ9UBN6 386 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 PCDHGB3Q9Y5G1 929 aa15.27■□□□□ 0.04
CDR2-207ENST00000569045 POLQO75417 2590 aa15.27■□□□□ 0.03
CDR2-207ENST00000569045 ANKRD17O75179 2603 aaKnown RBP15.26■□□□□ 0.03
CDR2-207ENST00000569045 C15orf38-AP3S2A0A0A6YYH1 394 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 LRRC3CA6NJW4 275 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 ULK1O75385 1050 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 TOXO94900 526 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 OR4F21O95013 312 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 LRATO95237 230 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 ATP1B1P05026 303 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 RFPL3SP0C7P2 107 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 NAGAP17050 411 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 ATP5F1P24539 256 aaPredicted RBP15.26■□□□□ 0.03
CDR2-207ENST00000569045 MSX1P28360 303 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 HMOX2P30519 316 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 FEN1P39748 380 aaKnown RBP15.26■□□□□ 0.03
CDR2-207ENST00000569045 TRPC1P48995 793 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 ALDH9A1P49189 494 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 CSTF3Q12996 717 aaKnown RBP15.26■□□□□ 0.03
CDR2-207ENST00000569045 TOMM20Q15388 145 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 TMEM64Q6YI46 380 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 GPRIN3Q6ZVF9 776 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 RPS27LQ71UM5 84 aaKnown RBP15.26■□□□□ 0.03
CDR2-207ENST00000569045 C1orf52Q8N6N3 182 aaKnown RBP15.26■□□□□ 0.03
CDR2-207ENST00000569045 CDYL2Q8N8U2 506 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 ACBD4Q8NC06 268 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 METTL6Q8TCB7 284 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 SPPL2AQ8TCT8 520 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 RILPQ96NA2 401 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 ZNF382Q96SR6 550 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 TREX2Q9BQ50 279 aaPredicted RBP15.26■□□□□ 0.03
CDR2-207ENST00000569045 PFDN4Q9NQP4 134 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 SPRR3Q9UBC9 169 aa15.26■□□□□ 0.03
CDR2-207ENST00000569045 FAM215AQ9Y5M1 114 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms