RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SIAH2O43255 324 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 CRLF1O75462 422 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 PRKRAO75569 313 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 CNOT4O95628 575 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 GPR75O95800 540 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 CLPSP04118 112 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 PCNAP12004 261 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 EPORP19235 508 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 CHMP24386 653 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 PTPN6P29350 595 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 GALNSP34059 522 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 MC3RP41968 323 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 CASP2P42575 452 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 PCYT1AP49585 367 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 RAP1GDS1P52306 607 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 E2F2Q14209 437 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 SETDB1Q15047 1291 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 DEPDC1Q5TB30 811 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 STEAP4Q687X5 459 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 ENPP6Q6UWR7 440 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 ADGRE4PQ86SQ3 457 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 LAS2Q8IYD9 372 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 PDIK1LQ8N165 341 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 ZCCHC7Q8N3Z6 543 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 OR1J4Q8NGS1 313 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 PPP1R14CQ8TAE6 165 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 ESAMQ96AP7 390 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 DOCK7Q96N67 2140 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 SORBS1Q9BX66 1292 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 OR51B5Q9H339 312 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 METTL7AQ9H8H3 244 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 CLCF1Q9UBD9 225 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 ASIC3Q9UHC3 531 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 CHMP2BQ9UQN3 213 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 NBEAL1Q6ZS30 2694 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 CCNT2O60583 730 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 TNFSF13O75888 250 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 NR2F6P10588 404 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 KRT15P19012 456 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 CRYGSP22914 178 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 ABCD3P28288 659 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 SSTR4P31391 388 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 ELK3P41970 407 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 PTH2RP49190 550 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 SLC12A2P55011 1212 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 HNRNPH2P55795 449 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 RPS13P62277 151 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 SRYQ05066 204 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 MGAT5Q09328 741 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 FRG1Q14331 258 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 HP1BP3Q5SSJ5 553 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 ANGPTL8Q6UXH0 198 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 LRRC70Q7Z2Q7 622 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 GRAMD2AQ8IUY3 354 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 PDPRQ8NCN5 879 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 C17orf47Q8NEP4 570 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 OR7G3Q8NG95 312 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 RGMAQ96B86 450 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 LRRC39Q96DD0 335 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 PIK3IP1Q96FE7 263 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 WFIKKN1Q96NZ8 548 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 MED18Q9BUE0 208 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 RBSNQ9H1K0 784 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 RHOJQ9H4E5 214 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 KLHL28Q9NXS3 571 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 CD274Q9NZQ7 290 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 MED12Q93074 2177 aa10.73□□□□□ -0.69
GTF3C1-209ENST00000568569 FREM3P0C091 2139 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 GOLGA6L10A0A0M3HER8 536 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 A0A1W2PNV4 684 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 GOLGA6L6A8MZA4 724 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 PGRMC1O00264 195 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 PLPP1O14494 284 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 SNPHO15079 494 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 SMNDC1O75940 238 aaKnown RBP eCLIP10.72□□□□□ -0.691e-7■■■□□ 18.1
GTF3C1-209ENST00000568569 RHOXF2BP0C7M4 288 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 SLC35E2BP0CK96 405 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 SLC35E2P0CK97 266 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 CDC25BP30305 580 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 ARFIP1P53367 373 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 FAM27E3Q08E93 113 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 KBTBD12Q3ZCT8 623 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 TMEM81Q6P7N7 255 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 PLXDC2Q6UX71 529 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 TRIM42Q8IWZ5 723 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 GALNT12Q8IXK2 581 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 PRR22Q8IZ63 422 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 SPATA6LQ8N4H0 392 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 OR14L1PQ8NHC6 308 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 HUS1BQ8NHY5 278 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 ADIPOR1Q96A54 375 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 PBKQ96KB5 322 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 FAM111AQ96PZ2 611 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 G6PC3Q9BUM1 346 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 ACTR8Q9H981 624 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 WDR41Q9HAD4 459 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 CXorf21Q9HAI6 301 aa10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 LYARQ9NX58 379 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-209ENST00000568569 NSMCE4AQ9NXX6 385 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms