RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.41■□□□□ 0.71e-8■■■□□ 15.2
MAP1LC3B-206ENST00000564844 EXOSC8Q96B26 276 aaKnown RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 FCRL1Q96LA6 429 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 IL17FQ96PD4 163 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 NLNQ9BYT8 704 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SAP130Q9H0E3 1048 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SLC28A3Q9HAS3 691 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GLTPQ9NZD2 209 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 KCNN3Q9UGI6 736 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 KCNE2Q9Y6J6 123 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ORC5O43913 435 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GPR37L1O60883 481 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MMP11P24347 488 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 NNMTP40261 264 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MANFP55145 182 aaKnown RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 WNT4P56705 351 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 WDR5P61964 334 aaKnown RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF630Q2M218 657 aaPredicted RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GRHL2Q6ISB3 625 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 METTL2BQ6P1Q9 378 aaKnown RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 Q6ZVU0 165 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR2AP1Q8NGE2 309 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 NEIL3Q8TAT5 605 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PLD4Q96BZ4 506 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SCRN2Q96FV2 425 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SPATA9Q9BWV2 254 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 KLF16Q9BXK1 252 aaPredicted RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PPP1R3EQ9H7J1 279 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SLAMF7Q9NQ25 335 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CNIH4Q9P003 139 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF624Q9P2J8 865 aaPredicted RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 EXTL2Q9UBQ6 330 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 KLHL21Q9UJP4 597 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GSTK1Q9Y2Q3 226 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TET1Q8NFU7 2136 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TEX46H3BTG2 121 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CKMP06732 381 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ARAFP10398 606 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CDONQ4KMG0 1287 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 FAM27D1Q5T7N8 215 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZER1Q7Z7L7 766 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CMTM8Q8IZV2 173 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SPEGQ15772 3267 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SLC28A2O43868 658 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ADAP00813 363 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PRKAR2AP13861 404 aaKnown RBP19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GIPRP48546 466 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 AP1S2P56377 157 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SNRPGP62308 76 aaKnown RBP19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CRHR2Q13324 411 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR11H4Q8NGC9 324 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 AKAP1Q92667 903 aaKnown RBP eCLIP19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ARMC5Q96C12 935 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 RIOK2Q9BVS4 552 aaKnown RBP19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SUV39H2Q9H5I1 410 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 NUDT15Q9NV35 164 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GULP1Q9UBP9 304 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PLXNA3P51805 1871 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF197O14709 1029 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PIPP12273 146 aaPredicted RBP19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CXCL3P19876 107 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SPIN4Q56A73 249 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 HSDL2Q6YN16 418 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CLDN22Q8N7P3 220 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 DCAF4L2Q8NA75 395 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR4K5Q8NGD3 323 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZFPM2Q8WW38 1151 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 KLK6Q92876 244 aa19.4■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SCN8AQ9UQD0 1980 aa19.39■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CPEP16870 476 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ELK1P19419 428 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PKLRP30613 574 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SPINT3P49223 89 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PCBP3P57721 371 aaKnown RBP19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TBPL1P62380 186 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PRKCZQ05513 592 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RPA4Q13156 261 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TNK1Q13470 666 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PLK5Q496M5 336 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 HSD11B1LQ7Z5J1 315 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CDH24Q86UP0 819 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 C9orf62Q8N4C0 152 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ANGPTL6Q8NI99 470 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 UFD1Q92890 307 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 BHLHE41Q9C0J9 482 aaPredicted RBP19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MCOLN1Q9GZU1 580 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MED28Q9H204 178 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TMEM245Q9H330 911 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FZD3Q9NPG1 666 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PIPSLA2A3N6 862 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 H0YIV9 168 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MEDAGQ5VYS4 303 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 C16orf62Q7Z3J2 963 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SLC43A3Q8NBI5 491 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PMEPA1Q969W9 287 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ABCG5Q9H222 651 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 NKIRAS2Q9NYR9 191 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TAAR2Q9P1P5 351 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ENOPH1Q9UHY7 261 aa19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FBXW2Q9UKT8 454 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms