RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SNX24Q9Y343 169 aa12.89□□□□□ -0.35
CDR2-204ENST00000564542 NPFFR2Q9Y5X5 522 aa12.89□□□□□ -0.35
CDR2-204ENST00000564542 DNHD1Q96M86 4753 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 WASHC1A8K0Z3 465 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 CLCA1A8K7I4 914 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 H0YIV9 168 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 EIF3HO15372 352 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDR2-204ENST00000564542 UGDHO60701 494 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 ACSL3O95573 720 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 LTA4HP09960 611 aaKnown RBP12.88□□□□□ -0.35
CDR2-204ENST00000564542 BMP7P18075 431 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 HOXC12P31275 282 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 SPRP35270 261 aaPredicted RBP12.88□□□□□ -0.35
CDR2-204ENST00000564542 BSGP35613 385 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 CUL3Q13618 768 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 SLMAPQ14BN4 828 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 DCST1Q5T197 706 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 HLA-DQA1Q5Y7H0 255 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 RAPH1Q70E73 1250 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 CMC1Q7Z7K0 106 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 NUDT13Q86X67 352 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 GALNT12Q8IXK2 581 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 C17orf47Q8NEP4 570 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 LINC01560Q8TB33 94 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 ADIPOR1Q96A54 375 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 WDYHV1Q96HA8 205 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 ACTR8Q9H981 624 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 CALHM2Q9HA72 323 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 CXorf21Q9HAI6 301 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 SAYSD1Q9NPB0 183 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 ANGPTL3Q9Y5C1 460 aa12.88□□□□□ -0.35
CDR2-204ENST00000564542 SYCE1LA8MT33 242 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 CDH16O75309 829 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 MTHFD2P13995 350 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 CRABP2P29373 138 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 CASP3P42574 277 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 AGFG1P52594 562 aaKnown RBP12.87□□□□□ -0.35
CDR2-204ENST00000564542 DCAF7P61962 342 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 LTBQ06643 244 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 FUT7Q11130 342 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 RCAN2Q14206 197 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 SETDB1Q15047 1291 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 TOMM20Q15388 145 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 EIPR1Q53HC9 387 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 C3orf62Q6ZUJ4 267 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 CTAGE3PQ8IX95 158 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 ZNF615Q8N8J6 731 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 ZPLD1Q8TCW7 415 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 ABTB1Q969K4 478 aaPredicted RBP12.87□□□□□ -0.35
CDR2-204ENST00000564542 NTNG2Q96CW9 530 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 C18orf12Q96KH6 178 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 DOCK7Q96N67 2140 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 YIPF4Q9BSR8 244 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 OR10A5Q9H207 317 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 PSD3Q9NYI0 1048 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 FETUBQ9UGM5 382 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 SAR1BQ9Y6B6 198 aa12.87□□□□□ -0.35
CDR2-204ENST00000564542 A0A1W2PS29 197 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 CCDC189A1A4V9 331 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 ERN1O75460 977 aaKnown RBP12.86□□□□□ -0.35
CDR2-204ENST00000564542 ACTL6AO96019 429 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 GSTA2P09210 222 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 CT62P0C5K7 136 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 TMIGD3P0DMS9 266 aaPredicted RBP12.86□□□□□ -0.35
CDR2-204ENST00000564542 PIK3R1P27986 724 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 ABCD3P28288 659 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 PTPN6P29350 595 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 NAGLUP54802 743 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 GPX6P59796 221 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 CALCOCO2Q13137 446 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 PCBP2Q15366 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDR2-204ENST00000564542 KBTBD12Q3ZCT8 623 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 WIPI1Q5MNZ9 446 aaPredicted RBP12.86□□□□□ -0.35
CDR2-204ENST00000564542 C6orf163Q5TEZ5 329 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 TIGD3Q6B0B8 471 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 TMEM81Q6P7N7 255 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 KRTAP1-3Q8IUG1 177 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 PPM1NQ8N819 430 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 C9orf106Q8NAJ2 232 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 FAM83FQ8NEG4 500 aaPredicted RBP12.86□□□□□ -0.35
CDR2-204ENST00000564542 OR7G1Q8NGA0 311 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 RHEBL1Q8TAI7 183 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 WDR20Q8TBZ3 569 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 UCN3Q969E3 161 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 ZFP3Q96NJ6 502 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 DACH2Q96NX9 599 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 SMR3AQ99954 134 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 SFXN3Q9BWM7 321 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
CDR2-204ENST00000564542 WHRNQ9P202 907 aa12.86□□□□□ -0.35
CDR2-204ENST00000564542 MPDZO75970 2070 aa12.85□□□□□ -0.35
CDR2-204ENST00000564542 FOXE1O00358 373 aaPredicted RBP12.85□□□□□ -0.35
CDR2-204ENST00000564542 GNB5O14775 395 aa12.85□□□□□ -0.35
CDR2-204ENST00000564542 PGRMC2O15173 223 aa12.85□□□□□ -0.35
CDR2-204ENST00000564542 SEMA3DO95025 777 aa12.85□□□□□ -0.35
CDR2-204ENST00000564542 GBAP04062 536 aa12.85□□□□□ -0.35
CDR2-204ENST00000564542 HRGP04196 525 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms