RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 CYB5D1Q6P9G0 228 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 SHC4Q6S5L8 630 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 CASC1Q6TDU7 716 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 ABRAXAS1Q6UWZ7 409 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF66Q6ZN08 573 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF704Q6ZNC4 412 aaPredicted RBP3.49□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF788Q6ZQV5 615 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 Q6ZSV7 163 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 ASB18Q6ZVZ8 466 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 SERPINA12Q8IW75 414 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 THEM5Q8N1Q8 247 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 CCNYQ8ND76 341 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 OR2T3Q8NH03 318 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 OR52I2Q8NH67 350 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 LILRB1Q8NHL6 650 aaPredicted RBP3.49□□□□□ -1.85
LIMA1-208ENST00000551691 SPATA3Q8NHX4 192 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 MPLKIPQ8TAP9 179 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 PIGTQ969N2 578 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 SLC25A28Q96A46 364 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 PHF21AQ96BD5 680 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 PYCR2Q96C36 320 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 RHBDF1Q96CC6 855 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 C3orf30Q96M34 536 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 TCEANC2Q96MN5 208 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 PANX3Q96QZ0 392 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 RANBP9Q96S59 729 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 SMR3AQ99954 134 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 PKP2Q99959 881 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 HSD17B14Q9BPX1 270 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 FAM213AQ9BRX8 229 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 ATG101Q9BSB4 218 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 NOX4Q9NPH5 578 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 POLE3Q9NRF9 147 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 TRNAU1APQ9NX07 287 aaKnown RBP3.49□□□□□ -1.85
LIMA1-208ENST00000551691 TUBA8Q9NY65 449 aaPredicted RBP3.49□□□□□ -1.85
LIMA1-208ENST00000551691 NINJ2Q9NZG7 142 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 PKD2L2Q9NZM6 624 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 VPS54Q9P1Q0 977 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 UXTQ9UBK9 157 aaPredicted RBP3.49□□□□□ -1.85
LIMA1-208ENST00000551691 ENTPD4Q9Y227 616 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 RUVBL2Q9Y230 463 aaKnown RBP3.49□□□□□ -1.85
LIMA1-208ENST00000551691 JRKLQ9Y4A0 524 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 IKBKGQ9Y6K9 419 aa3.49□□□□□ -1.85
LIMA1-208ENST00000551691 DIDO1Q9BTC0 2240 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 ATP8B3O60423 1300 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 PTPRJQ12913 1337 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 SCN1AP35498 2009 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 A0A0A6YYC8 382 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 IGHV4-28A0A0C4DH34 117 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 RGSL1A5PLK6 1076 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 OR5K3A6NET4 321 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 PRSS44E7EML9 344 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 I3L1I5 382 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 PIRO00625 290 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 NVLO15381 856 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 CACNG3O60359 315 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 SNX3O60493 162 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 GMNNO75496 209 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 MOCS2O96007 188 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 GSRP00390 522 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 OAS1P00973 400 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 IGHV2-70P01814 119 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 AREGP15514 252 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 CYP2A7P20853 494 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 AHCYP23526 432 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 PSMB4P28070 264 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 CDC25AP30304 524 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 ASMTP46597 345 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 IER3P46695 156 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 RABIFP47224 123 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 CAMLGP49069 296 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 COMPP49747 757 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 MXI1P50539 228 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 TKTL1P51854 596 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 HTD2P86397 168 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 EEF1A2Q05639 463 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 SULT2A1Q06520 285 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF177Q13360 481 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 CALCRLQ16602 461 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 GALNT17Q6IS24 598 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 PODNL1Q6PEZ8 512 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 FJX1Q86VR8 437 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 ANKRD46Q86W74 232 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 NRROSQ86YC3 692 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 AQP12AQ8IXF9 295 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 DCP1BQ8IZD4 617 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 RNF113BQ8IZP6 322 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 ARHGAP24Q8N264 748 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 ARFGAP1Q8N6T3 406 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 NOA1Q8NC60 698 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 C2orf15Q8WU43 125 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 TMEM255BQ8WV15 326 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 BCL2L2Q92843 193 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 KLK6Q92876 244 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 LINGO1Q96FE5 620 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 VPS39Q96JC1 886 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 XPO6Q96QU8 1125 aaKnown RBP3.48□□□□□ -1.85
LIMA1-208ENST00000551691 KCNK16Q96T55 309 aa3.48□□□□□ -1.85
LIMA1-208ENST00000551691 CSF3RQ99062 836 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms