RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 DCLRE1CQ96SD1 692 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 YIPF4Q9BSR8 244 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 MCOLN1Q9GZU1 580 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 RNF121Q9H920 327 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 CUEDC1Q9NWM3 386 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 TEX10Q9NXF1 929 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 TRPC4Q9UBN4 977 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 MAU2Q9Y6X3 613 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 LRRK1Q38SD2 2015 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 POLR1CO15160 346 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 MMP20O60882 483 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 NCR1O76036 304 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 C8AP07357 584 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 PRKCAP17252 672 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 SOX18P35713 384 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 RPS5P46782 204 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 FABP5Q01469 135 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 MAP4K2Q12851 820 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 SNAPC1Q16533 368 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 FAM26EQ8N5C1 309 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 AMER3Q8N944 861 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 KCTD7Q96MP8 289 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 FRMD6Q96NE9 622 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 FNDC11Q9BVV2 318 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 MAN2C1Q9NTJ4 1040 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 FBXW2Q9UKT8 454 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 ASF1AQ9Y294 204 aa13.37□□□□□ -0.27
RAPGEF3-218ENST00000548919 PPM1DO15297 605 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 MYL12AP19105 171 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 PSMB5P28074 263 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 SLC9A3P48764 834 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 CCT3P49368 545 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 MAN2A2P49641 1150 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 GALK2Q01415 458 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 INSL4Q14641 139 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 FAM92BQ6ZTR7 304 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 FAM129CQ86XR2 697 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 KIF18BQ86Y91 864 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 CLDN22Q8N7P3 220 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 FBXO15Q8NCQ5 510 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 OR6T1Q8NGN1 323 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 ENKURQ8TC29 256 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 SMPDL3AQ92484 453 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 ZNF607Q96SK3 696 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 POLDIP3Q9BY77 421 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 TAC3Q9UHF0 121 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 ACAD8Q9UKU7 415 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 HCFC2Q9Y5Z7 792 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 KIAA1549LQ6ZVL6 1849 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 TCF20Q9UGU0 1960 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 CENPBD1B2RD01 187 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 TMPRSS11DO60235 418 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 PRKRAO75569 313 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 POP7O75817 140 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 STATHP02808 62 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 ALPPL2P10696 532 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 BSGP35613 385 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 GAS1P54826 345 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 WNT4P56705 351 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 P2RY14Q15391 338 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 KHDRBS2Q5VWX1 349 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 RAET1GQ6H3X3 334 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 TYW3Q6IPR3 259 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 LHFPL3Q86UP9 236 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 NLGN4YQ8NFZ3 816 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 C17orf50Q8WW18 174 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 ZDHHC5Q9C0B5 715 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 QRSL1Q9H0R6 528 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 OR51I1Q9H343 314 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 ZSCAN32Q9NX65 697 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 NFKBIL1Q9UBC1 381 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 TMA7Q9Y2S6 64 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 WNT6Q9Y6F9 365 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 CLCA3PQ9Y6N3 262 aa13.36□□□□□ -0.27
RAPGEF3-218ENST00000548919 OR6C70A6NIJ9 312 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 EPPINO95925 133 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 YES1P07947 543 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 NR2F1P10589 423 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 PSKH1P11801 424 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 MAPK9P45984 424 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 PRKAG1P54619 331 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 BNC1Q01954 994 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 MLLT1Q03111 559 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 C11orf96Q7Z7L8 435 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 DDX53Q86TM3 631 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 GDPD1Q8N9F7 314 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 SIMC1Q8NDZ2 872 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 LHX9Q9NQ69 397 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 SPHK2Q9NRA0 654 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 SF3B6Q9Y3B4 125 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 MYO7AQ13402 2215 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 CXorf51AA0A1B0GTR3 108 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 GLOD5A6NK44 160 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 HPGDSO60760 199 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 CPNE3O75131 537 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 PDE9AO76083 593 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 LGI1O95970 557 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms