RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 NPFFR2Q9Y5X5 522 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 MTORP42345 2549 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 ZFHX3Q15911 3703 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 HMX2A2RU54 273 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 KLHL2O95198 593 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 CLDN9O95484 217 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 TACR1P25103 407 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 TYK2P29597 1187 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 CASQ1P31415 396 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 TMED10P49755 219 aaKnown RBP18.65■□□□□ 0.58
SSH1-207ENST00000547862 ARFIP1P53367 373 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 NRG3P56975 720 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 FLYWCH1Q4VC44 716 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 FAM219BQ5XKK7 198 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 ANP32BQ92688 251 aaKnown RBP18.65■□□□□ 0.58
SSH1-207ENST00000547862 NSUN5Q96P11 429 aaKnown RBP18.65■□□□□ 0.58
SSH1-207ENST00000547862 GNRHR2Q96P88 292 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 TRIB1Q96RU8 372 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 SERPINI1Q99574 410 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 MRPL1Q9BYD6 325 aaKnown RBP18.65■□□□□ 0.58
SSH1-207ENST00000547862 BRINP2Q9C0B6 783 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 OR10A5Q9H207 317 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 ST6GALNAC2Q9UJ37 374 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 C15orf41Q9Y2V0 281 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 NF1P21359 2839 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 PRRC2AP48634 2157 aaKnown RBP18.65■□□□□ 0.58
SSH1-207ENST00000547862 MED12Q93074 2177 aa18.65■□□□□ 0.58
SSH1-207ENST00000547862 EEF1E1-BLOC1S5C9J1V9 151 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 OR7A17O14581 309 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 EEF1E1O43324 174 aaKnown RBP18.64■□□□□ 0.57
SSH1-207ENST00000547862 ALDOAP04075 364 aaKnown RBP18.64■□□□□ 0.57
SSH1-207ENST00000547862 KLK1P06870 262 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 CD99P14209 185 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 AGFG1P52594 562 aaKnown RBP18.64■□□□□ 0.57
SSH1-207ENST00000547862 EIPR1Q53HC9 387 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 DCST1Q5T197 706 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 CCDC91Q7Z6B0 441 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 PACS2Q86VP3 889 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 LACC1Q8IV20 430 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 PLD6Q8N2A8 252 aaKnown RBP18.64■□□□□ 0.57
SSH1-207ENST00000547862 L3MBTL4Q8NA19 623 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 OR4K14Q8NGD5 310 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 GOT1L1Q8NHS2 421 aaPredicted RBP18.64■□□□□ 0.57
SSH1-207ENST00000547862 HSPBAP1Q96EW2 488 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 LRRC46Q96FV0 321 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 SH3GL2Q99962 352 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 METTL7AQ9H8H3 244 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 DTX4Q9Y2E6 619 aa18.64■□□□□ 0.57
SSH1-207ENST00000547862 TNPO3Q9Y5L0 923 aaKnown RBP18.64■□□□□ 0.57
SSH1-207ENST00000547862 FOXE1O00358 373 aaPredicted RBP18.63■□□□□ 0.57
SSH1-207ENST00000547862 SEMA3DO95025 777 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 IL2RAP01589 272 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 GALNSP34059 522 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 CDK9P50750 372 aaKnown RBP18.63■□□□□ 0.57
SSH1-207ENST00000547862 XKP51811 444 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 RPP38P78345 283 aaKnown RBP18.63■□□□□ 0.57
SSH1-207ENST00000547862 IFT88Q13099 833 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 WIPI1Q5MNZ9 446 aaPredicted RBP18.63■□□□□ 0.57
SSH1-207ENST00000547862 CCNYL2Q5T2Q4 361 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 DESI1Q6ICB0 168 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 RPS27LQ71UM5 84 aaKnown RBP18.63■□□□□ 0.57
SSH1-207ENST00000547862 MMP21Q8N119 569 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 RNASE6Q93091 150 aaKnown RBP18.63■□□□□ 0.57
SSH1-207ENST00000547862 GPR78Q96P69 363 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 TIMP4Q99727 224 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 NXF5Q9H1B4 397 aaKnown RBP18.63■□□□□ 0.57
SSH1-207ENST00000547862 RASSF1Q9NS23 344 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 EHD3Q9NZN3 535 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 XPR1Q9UBH6 696 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 MTRF1LQ9UGC7 380 aaKnown RBP18.63■□□□□ 0.57
SSH1-207ENST00000547862 BCAP29Q9UHQ4 241 aa18.63■□□□□ 0.57
SSH1-207ENST00000547862 A6NNC1 897 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 AHRRA9YTQ3 701 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 EPPINO95925 133 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 CPMP14384 443 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 GPX3P22352 226 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 ABCD3P28288 659 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 CASP3P42574 277 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 ZNF136P52737 540 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 PPP2R2AP63151 447 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 TRAF3Q13114 568 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 EXOSC7Q15024 291 aaKnown RBP18.62■□□□□ 0.57
SSH1-207ENST00000547862 FNDC7Q5VTL7 733 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 FRG2Q64ET8 278 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 C8orf74Q6P047 294 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 ANGPTL8Q6UXH0 198 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 SYT10Q6XYQ8 523 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 YRDCQ86U90 279 aaKnown RBP18.62■□□□□ 0.57
SSH1-207ENST00000547862 PM20D2Q8IYS1 436 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 ZNF615Q8N8J6 731 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 NINJ1Q92982 152 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 ADIPOR1Q96A54 375 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 TP53INP1Q96A56 240 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 FRG2BQ96QU4 278 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 FOXC2Q99958 501 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 ITPAQ9BY32 194 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 UGT2B28Q9BY64 529 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 ANGPTL4Q9BY76 406 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 EPB41L4BQ9H329 900 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 CBLCQ9ULV8 474 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms