RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 RPLP2P05387 115 aaKnown RBP7.49□□□□□ -1.21
UBR1-202ENST00000546274 NMBP08949 121 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 G0S2P27469 103 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 GKP32189 559 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 HSPA7P48741 367 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 AGFG1P52594 562 aaKnown RBP7.49□□□□□ -1.21
UBR1-202ENST00000546274 RIDAP52758 137 aaKnown RBP7.49□□□□□ -1.21
UBR1-202ENST00000546274 KCNA10Q16322 511 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 SSX2Q16385 188 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 C4orf46Q504U0 113 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 SPANXN4Q5MJ08 99 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 CXorf57Q6NSI4 855 aaKnown RBP7.49□□□□□ -1.21
UBR1-202ENST00000546274 KRT77Q7Z794 578 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 C12orf40Q86WS4 652 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 CBLN2Q8IUK8 224 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 IL17RCQ8NAC3 791 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 TBC1D20Q96BZ9 403 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 FBXO17Q96EF6 278 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 COL21A1Q96P44 957 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 BOCQ9BWV1 1114 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 DNTTIP1Q9H147 329 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 CLMPQ9H6B4 373 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 FOLH1BQ9HBA9 442 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 POLE3Q9NRF9 147 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 LATS2Q9NRM7 1088 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 DCAF13Q9NV06 445 aaKnown RBP7.49□□□□□ -1.21
UBR1-202ENST00000546274 NDUFAF4Q9P032 175 aa7.49□□□□□ -1.21
UBR1-202ENST00000546274 OBSL1O75147 1896 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 CLCA1A8K7I4 914 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 SELENOFO60613 162 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 EOMESO95936 686 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 GLUD1P00367 558 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 OTCP00480 354 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 ALPIP09923 528 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 GDF5P43026 501 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 TSPAN5P62079 268 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 CHAF1BQ13112 559 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 IKZF1Q13422 519 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 OPCMLQ14982 345 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 ZSWIM7Q19AV6 140 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 SFRP5Q5T4F7 317 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 DDI2Q5TDH0 399 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 FAM171A1Q5VUB5 890 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 CPZQ66K79 652 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 NCEH1Q6PIU2 408 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 RNF165Q6ZSG1 346 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 GPR149Q86SP6 731 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 CALHM3Q86XJ0 350 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 PHACTR4Q8IZ21 702 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 BOLLQ8N9W6 283 aaKnown RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 DUSP18Q8NEJ0 188 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 OTUB1Q96FW1 271 aaPredicted RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 ERMAPQ96PL5 475 aaPredicted RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 SIGLEC11Q96RL6 698 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 SEMA4CQ9C0C4 833 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 SERHLQ9NQF3 203 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 NUDT15Q9NV35 164 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 IL17CQ9P0M4 197 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 MYEF2Q9P2K5 600 aaKnown RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 HCSTQ9UBK5 93 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 GPN3Q9UHW5 284 aaPredicted RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 RPS6KA6Q9UK32 745 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 SSR3Q9UNL2 185 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 SLC6A5Q9Y345 797 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 PRSS21Q9Y6M0 314 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 KIAA1671Q9BY89 1806 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 GLYATL1P3A0A0U1RQE8 302 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 GFRA2O00451 464 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 CXCR6O00574 342 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 TSPAN3O60637 253 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 HCN1O60741 890 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 GADD45GO95257 159 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 B3GALT4O96024 378 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 IGHV2-70P01814 119 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 NDUFB7P17568 137 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 DDX6P26196 483 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBR1-202ENST00000546274 PTPN6P29350 595 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 HOXA9P31269 272 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 TSPAN7P41732 249 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 FAM189BP81408 668 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 HMGCS1Q01581 520 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 MC2RQ01718 297 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 ZNF528Q3MIS6 628 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 BICRALQ6AI39 1079 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 LINGO4Q6UY18 593 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 USP53Q70EK8 1073 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 SLC24A5Q71RS6 500 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 ZNF551Q7Z340 670 aaPredicted RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 TRIM46Q7Z4K8 759 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 ZDHHC21Q8IVQ6 265 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 LIX1Q8N485 282 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 DNAJC22Q8N4W6 341 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 NETO1Q8TDF5 533 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 BTN2A2Q8WVV5 523 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 GTF3AQ92664 365 aaKnown RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 NELL1Q92832 810 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 WBP2Q969T9 261 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 ADAT1Q9BUB4 502 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms