RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 NAGLUP54802 743 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 DR1Q01658 176 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 FUT7Q11130 342 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 FOXF2Q12947 444 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 DLG1Q12959 904 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 PCBP2Q15366 365 aaKnown RBP eCLIP15.21■□□□□ 0.031e-6■■■■□ 24.4
CPSF7-225ENST00000545934 WIPI1Q5MNZ9 446 aaPredicted RBP15.21■□□□□ 0.03
CPSF7-225ENST00000545934 TIGD3Q6B0B8 471 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 PACS2Q86VP3 889 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 C17orf47Q8NEP4 570 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 STAG3L4Q8TBR4 150 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 UCN3Q969E3 161 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 ISL2Q96A47 359 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 UCN2Q96RP3 112 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 YIPF4Q9BSR8 244 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 TEX10Q9NXF1 929 aaPredicted RBP15.21■□□□□ 0.03
CPSF7-225ENST00000545934 FBN3Q75N90 2809 aa15.21■□□□□ 0.03
CPSF7-225ENST00000545934 GLOD5A6NK44 160 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 ACTL6AO96019 429 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 CT62P0C5K7 136 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 TMIGD3P0DMS9 266 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-225ENST00000545934 NR2F6P10588 404 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 CPN1P15169 458 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 SSTR1P30872 391 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 TMED10P49755 219 aaKnown RBP15.2■□□□□ 0.02
CPSF7-225ENST00000545934 RAB10P61026 200 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 RPS13P62277 151 aaKnown RBP15.2■□□□□ 0.02
CPSF7-225ENST00000545934 DDX39BQ13838 428 aaKnown RBP15.2■□□□□ 0.02
CPSF7-225ENST00000545934 TMEM81Q6P7N7 255 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 PRIMA1Q86XR5 153 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 ZBED8Q8IZ13 594 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 EXT2Q93063 718 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 ABTB1Q969K4 478 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-225ENST00000545934 COX4I2Q96KJ9 171 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 MTERF1Q99551 399 aaKnown RBP15.2■□□□□ 0.02
CPSF7-225ENST00000545934 CPNE1Q99829 537 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 SFXN3Q9BWM7 321 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 ALG9Q9H6U8 611 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 GALNT8Q9NY28 637 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 PSD3Q9NYI0 1048 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 OPTCQ9UBM4 332 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 DSCAMO60469 2012 aa15.2■□□□□ 0.02
CPSF7-225ENST00000545934 H0YIV9 168 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 UBXN8O00124 270 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 KERAO60938 352 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 RCBTB2O95199 551 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 AIFM1O95831 613 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 LY6G6DO95868 133 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 FAM58BPP0C7Q3 252 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 MTHFD2P13995 350 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 PTX3P26022 381 aaPredicted RBP15.19■□□□□ 0.02
CPSF7-225ENST00000545934 GP5P40197 560 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 MASP1P48740 699 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 CUL3Q13618 768 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 POU4F3Q15319 338 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 LIPJQ5W064 366 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 CYS1Q717R9 158 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 KLHL7Q8IXQ5 586 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 FAM83FQ8NEG4 500 aaPredicted RBP15.19■□□□□ 0.02
CPSF7-225ENST00000545934 ZFP3Q96NJ6 502 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 PIP5K1AQ99755 562 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 TUBA1CQ9BQE3 449 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 CENPKQ9BS16 269 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 RBM24Q9BX46 236 aaKnown RBP15.19■□□□□ 0.02
CPSF7-225ENST00000545934 OR10A5Q9H207 317 aa15.19■□□□□ 0.02
CPSF7-225ENST00000545934 SH3D21A4FU49 640 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 FAM159BA6NKW6 160 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 FAM171A2A8MVW0 826 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 PGRMC2O15173 223 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 CDH16O75309 829 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 ERN1O75460 977 aaKnown RBP15.18■□□□□ 0.02
CPSF7-225ENST00000545934 ABCB1P08183 1280 aaPredicted RBP15.18■□□□□ 0.02
CPSF7-225ENST00000545934 EPB42P16452 691 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 NAGAP17050 411 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
CPSF7-225ENST00000545934 ABCD3P28288 659 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 PTGDSP41222 190 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 RPP38P78345 283 aaKnown RBP15.18■□□□□ 0.02
CPSF7-225ENST00000545934 RCAN2Q14206 197 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 OR52E8Q6IFG1 317 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 CAPN12Q6ZSI9 719 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 YRDCQ86U90 279 aaKnown RBP15.18■□□□□ 0.02
CPSF7-225ENST00000545934 GALNT12Q8IXK2 581 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 LRRC75A-AS1Q8N1F1 130 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 HGDQ93099 445 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 G6PC3Q9BUM1 346 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 PCDHGA11Q9Y5H2 935 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 ARID1AO14497 2285 aa15.18■□□□□ 0.02
CPSF7-225ENST00000545934 TCRBV9S1A1TA0A576 114 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 SUPT3HB4E1H0 165 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 GNB5O14775 395 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 SNPHO15079 494 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 SUPT3HO75486 399 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 RHOXF2BP0C7M4 288 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 CYP4B1P13584 511 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 S1PR1P21453 382 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 GPX3P22352 226 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 NRG3P56975 720 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 SETDB1Q15047 1291 aa15.17■□□□□ 0.02
CPSF7-225ENST00000545934 HLA-DQA1Q5Y7H0 255 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms