RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RUNX1T1Q06455 604 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 MAP4K2Q12851 820 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 GPR50Q13585 617 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 PDZD3Q86UT5 571 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 AMZ2Q86W34 360 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 MMAAQ8IVH4 418 aaKnown RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 ZFP41Q8N8Y5 198 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 PROKR2Q8NFJ6 384 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 GATAD2BQ8WXI9 593 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 DHRS1Q96LJ7 313 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 TEFMQ96QE5 360 aaKnown RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 AIF1LQ9BQI0 150 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 FNDC11Q9BVV2 318 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 ANKRA2Q9H9E1 313 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 MAN2C1Q9NTJ4 1040 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 TOR4AQ9NXH8 423 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 ZNF221Q9UK13 617 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 TRAPPC4Q9Y296 219 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 LRRK1Q38SD2 2015 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 XIRP2A4UGR9 3374 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 C17orf113A0A1B0GUU1 675 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 MSL3P1P0C860 447 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 ADH5P11766 374 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 EPCAMP16422 314 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 BUD31P41223 144 aaPredicted RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 MLLT1Q03111 559 aaPredicted RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 FAM131AQ6UXB0 335 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 ZNF517Q6ZMY9 492 aaPredicted RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 DCUN1D3Q8IWE4 304 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 TBC1D19Q8N5T2 526 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 ZNF557Q8N988 423 aaPredicted RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 TP53I13Q8NBR0 393 aaPredicted RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 RSPRY1Q96DX4 576 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 LINC00615Q96LM1 132 aaPredicted RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 ZNF582Q96NG8 517 aaPredicted RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 TM9SF2Q99805 663 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 SRRQ9GZT4 340 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 RACGAP1Q9H0H5 632 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 MIXL1Q9H2W2 232 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 RHBGQ9H310 441 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 XKR8Q9H6D3 395 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 NEUROD4Q9HD90 331 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 ZCCHC3Q9NUD5 404 aaKnown RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 KLHL20Q9Y2M5 609 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 NDUFS4O43181 175 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 ERAL1O75616 437 aaKnown RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 PDE9AO76083 593 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 PCCBP05166 539 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 HOXB3P14651 431 aaPredicted RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 ENDOUP21128 410 aaKnown RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 SDC2P34741 201 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 CD79BP40259 229 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 EPHA5P54756 1037 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 SNAPC1Q16533 368 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 SPRED2Q7Z698 418 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 CAMKK1Q8N5S9 505 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 TM9SF4Q92544 642 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 ZBED6CLQ96FA7 236 aaPredicted RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 SLC35G5Q96KT7 338 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 NELL2Q99435 816 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 DPH7Q9BTV6 452 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 AICDAQ9GZX7 198 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 KLHL31Q9H511 634 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 MARK1Q9P0L2 795 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 FBXW2Q9UKT8 454 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 ACAD8Q9UKU7 415 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 CMAHPQ9Y471 501 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 KCNE3Q9Y6H6 103 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 A0A1W2PQL4 384 aaPredicted RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 GNRH1P01148 92 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 CSF2P04141 144 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 CHRM4P08173 479 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 C8orf89P0DMQ9 161 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 CCL5P13501 91 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 PTNP21246 168 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 ITGB7P26010 798 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 CCR8P51685 355 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 RPS25P62851 125 aaKnown RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.92□□□□□ -0.02
LDLR-204ENST00000545707 MLLT11Q13015 90 aaPredicted RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 SLAMF1Q13291 335 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 C1DQ13901 141 aaKnown RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 KIF18BQ86Y91 864 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 HCAR2Q8TDS4 363 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 SLC9A6Q92581 669 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 TMCO6Q96DC7 493 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 C1GALT1C1Q96EU7 318 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 ZNF514Q96K75 400 aaPredicted RBP14.92□□□□□ -0.02
LDLR-204ENST00000545707 P2RX2Q9UBL9 471 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 GPR34Q9UPC5 381 aa14.92□□□□□ -0.02
LDLR-204ENST00000545707 CHD9Q3L8U1 2897 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 IDH3BO43837 385 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 FKTNO75072 461 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 GJA8P48165 433 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 NCBP2P52298 156 aaKnown RBP eCLIP14.91□□□□□ -0.02
LDLR-204ENST00000545707 LASP1Q14847 261 aaKnown RBP14.91□□□□□ -0.02
LDLR-204ENST00000545707 OCLNQ16625 522 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 CLEC12AQ5QGZ9 265 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 NDUFAF5Q5TEU4 345 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 ZNF544Q6NX49 715 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms