RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 MED17Q9NVC6 651 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 HCN2Q9UL51 889 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 STUB1Q9UNE7 303 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 CKAP5Q14008 2032 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 IGKV1-8A0A0C4DH67 115 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 LOC100506127A0A0U1RQW1 187 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 HYKKA2RU49 373 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 DUXAA6NLW8 204 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 H3BN98 237 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 STK25O00506 426 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 AQP9O43315 295 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 ADAM23O75077 832 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 FCARP24071 287 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 MPIP34949 423 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 RPS26P62854 115 aaKnown RBP11.76□□□□□ -0.53
PAAF1-215ENST00000544909 CDK5Q00535 292 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 BNC1Q01954 994 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 TARDBPQ13148 414 aaKnown RBP eCLIP11.76□□□□□ -0.53
PAAF1-215ENST00000544909 MLF2Q15773 248 aaPredicted RBP11.76□□□□□ -0.53
PAAF1-215ENST00000544909 SSX1Q16384 188 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 TSTQ16762 297 aaKnown RBP11.76□□□□□ -0.53
PAAF1-215ENST00000544909 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 PDE4DIPQ5VU43 2346 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 STEAP3Q658P3 488 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 SLC48A1Q6P1K1 146 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 WASH2PQ6VEQ5 465 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 DEF8Q6ZN54 512 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 PARP16Q8N5Y8 322 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 CLDN22Q8N7P3 220 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 MORN4Q8NDC4 146 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 OR4K5Q8NGD3 323 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 OR5M11Q96RB7 305 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 INSM2Q96T92 566 aaPredicted RBP11.76□□□□□ -0.53
PAAF1-215ENST00000544909 CDCA3Q99618 268 aaPredicted RBP11.76□□□□□ -0.53
PAAF1-215ENST00000544909 LGR4Q9BXB1 951 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 TMEM121BQ9BXQ6 578 aaPredicted RBP11.76□□□□□ -0.53
PAAF1-215ENST00000544909 TEX12Q9BXU0 123 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 LMAN2LQ9H0V9 348 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 HHATLQ9HCP6 504 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 OR6C2Q9NZP2 312 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 ZNF229Q9UJW7 825 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 SNX7Q9UNH6 387 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 WDR37Q9Y2I8 494 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 KLHL20Q9Y2M5 609 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 ASB4Q9Y574 426 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 PCDHGB6Q9Y5F9 930 aa11.76□□□□□ -0.53
PAAF1-215ENST00000544909 NUMA1Q14980 2115 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 TMEM221A6NGB7 291 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 PDZK1P1A8MUH7 402 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 MYL12BO14950 172 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 PRODHO43272 600 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 EMC8O43402 210 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 PCDH8O95206 1070 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 RAB36O95755 333 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 IL1AP01583 271 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 APOA1P02647 267 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 TP53P04637 393 aaPredicted RBP11.75□□□□□ -0.53
PAAF1-215ENST00000544909 APODP05090 189 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 OR12D1P0DN82 309 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 CSNK2A2P19784 350 aaPredicted RBP11.75□□□□□ -0.53
PAAF1-215ENST00000544909 PRKAR1BP31321 381 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 GRK5P34947 590 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 GJA4P35212 333 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 GIPRP48546 466 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 NCBP2P52298 156 aaKnown RBP eCLIP11.75□□□□□ -0.53
PAAF1-215ENST00000544909 IRF4Q15306 451 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 ZNF776Q68DI1 518 aaPredicted RBP11.75□□□□□ -0.53
PAAF1-215ENST00000544909 ZNF425Q6IV72 752 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 CYP4Z2PQ8N1L4 340 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 FGF11Q92914 225 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 RAB8BQ92930 207 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 FERD3LQ96RJ6 166 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 SLC30A2Q9BRI3 323 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 MED18Q9BUE0 208 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 ABCG4Q9H172 646 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 EVA1AQ9H8M9 152 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 FGF20Q9NP95 211 aaPredicted RBP11.75□□□□□ -0.53
PAAF1-215ENST00000544909 PRDM7Q9NQW5 492 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 MAN2C1Q9NTJ4 1040 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 TESQ9UGI8 421 aaKnown RBP11.75□□□□□ -0.53
PAAF1-215ENST00000544909 PNMA8BQ9ULN7 279 aaPredicted RBP11.75□□□□□ -0.53
PAAF1-215ENST00000544909 STON1Q9Y6Q2 735 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 COLEC10Q9Y6Z7 277 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 TRPM6Q9BX84 2022 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 CCDC88CQ9P219 2028 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 HEATR5BQ9P2D3 2071 aa11.75□□□□□ -0.53
PAAF1-215ENST00000544909 FEZF1A0PJY2 475 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 HSMCR30P0CW71 290 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 ATP5A1P25705 553 aaKnown RBP11.74□□□□□ -0.53
PAAF1-215ENST00000544909 POU1F1P28069 291 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 PSMB5P28074 263 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 CMPK1P30085 196 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 MAN2A2P49641 1150 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 RORCP51449 518 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 RUNX1T1Q06455 604 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 HYAL2Q12891 473 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 SYPL1Q16563 259 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 INAVAQ3KP66 663 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 PODNL1Q6PEZ8 512 aa11.74□□□□□ -0.53
PAAF1-215ENST00000544909 ZNF793Q6ZN11 406 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms