RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZNF540Q8NDQ6 660 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 NUP43Q8NFH3 380 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 MUL1Q969V5 352 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 GTPBP3Q969Y2 492 aaKnown RBP16.07■□□□□ 0.16
PTPRO-209ENST00000543886 ELP4Q96EB1 424 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 KLHDC7BQ96G42 594 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 EQTNQ9NQ60 294 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 GPR27Q9NS67 375 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 GALNT8Q9NY28 637 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 ERVK-18Q9QC07 812 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 KLK4Q9Y5K2 254 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 LOC105369274A0A096LPK9 316 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 LOC102723532A0A0G2JNH3 316 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 CHURC1-FNTBB4DL54 471 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 FFAR1O14842 300 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 PCDHGA12O60330 932 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 EIF2S1P05198 315 aaKnown RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SMIM10L1P0DMW3 83 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 POU2F1P14859 743 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 PVRP15151 417 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 ITIH1P19827 911 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 CBLP22681 906 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 TMBIM6P55061 237 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SLC35A2P78381 396 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 RELAQ04206 551 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SMN1Q16637 294 aaKnown RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 LAIR1Q6GTX8 287 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 FRMPD2BQ6IN97 320 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 PARGQ86W56 976 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 P3H2Q8IVL5 708 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SFTPA2Q8IWL1 248 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 OR4N4Q8N0Y3 316 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 LRRC25Q8N386 305 aaPredicted RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 ZNF655Q8N720 491 aaPredicted RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 BAHD1Q8TBE0 780 aaPredicted RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 KLHL6Q8WZ60 621 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 UBE2FQ969M7 185 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 C16orf58Q96GQ5 468 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SMIM10Q96HG1 83 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 BTBD2Q9BX70 525 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 NAA50Q9GZZ1 169 aaKnown RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 DUSP21Q9H596 190 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 NMNAT1Q9HAN9 279 aaPredicted RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 LMAN1LQ9HAT1 526 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 WARS2Q9UGM6 360 aaKnown RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 CA14Q9ULX7 337 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 RNF6Q9Y252 685 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 CCDC88CQ9P219 2028 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 H0YGG7 62 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 ZNF217O75362 1048 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 H1F0P07305 194 aaKnown RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 CHRM4P08173 479 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 PCMT1P22061 227 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SMIM11AP58511 58 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 ARF3P61204 181 aaPredicted RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 CSNK2BP67870 215 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 C1orf61Q13536 156 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 LTB4RQ15722 352 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 NPTX1Q15818 432 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 TCTN3Q6NUS6 607 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 ARMC6Q6NXE6 501 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 OOSP2Q86WS3 158 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 DEPDC4Q8N2C3 294 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 PARP8Q8N3A8 854 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 OR4K14Q8NGD5 310 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 IPCEF1Q8WWN9 437 aaPredicted RBP16.06■□□□□ 0.16
PTPRO-209ENST00000543886 RLN3Q8WXF3 142 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 KAT2AQ92830 837 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 C10orf90Q96M02 699 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SLC6A18Q96N87 628 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 OR7D2Q96RA2 312 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 DCUN1D5Q9BTE7 237 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 TPSD1Q9BZJ3 242 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 EVA1BQ9NVM1 165 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 C2orf42Q9NWW7 574 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 MS4A12Q9NXJ0 267 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 KCMF1Q9P0J7 381 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SLC9A8Q9Y2E8 581 aa16.06■□□□□ 0.16
PTPRO-209ENST00000543886 SCN3AQ9NY46 2000 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 A0A0G2JPF8 293 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 HNRNPCL2B2RXH8 293 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 HNRNPCL3B7ZW38 293 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 ZSCAN9O15535 394 aaPredicted RBP16.05■□□□□ 0.16
PTPRO-209ENST00000543886 RGS10O43665 173 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 NDUFS2O75306 463 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 WBP4O75554 376 aaKnown RBP16.05■□□□□ 0.16
PTPRO-209ENST00000543886 ATE1O95260 518 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 HNRNPCL4P0DMR1 293 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 ALOX12P18054 663 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 FUT4P22083 530 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 LSSP48449 732 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 IDH2P48735 452 aaKnown RBP16.05■□□□□ 0.16
PTPRO-209ENST00000543886 SNRPNP63162 240 aaKnown RBP16.05■□□□□ 0.16
PTPRO-209ENST00000543886 HHEXQ03014 270 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 FUT5Q11128 374 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 DCTN2Q13561 401 aaKnown RBP16.05■□□□□ 0.16
PTPRO-209ENST00000543886 PRAMEF8Q5VWM4 474 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 PRAMEF7Q5VXH5 474 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 ZNF761Q86XN6 746 aaPredicted RBP16.05■□□□□ 0.16
PTPRO-209ENST00000543886 FAM160A2Q8N612 972 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms