RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ACADSBP45954 432 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 KRT6CP48668 564 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 B3GALT5-AS1P59052 145 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 DCDC1P59894 354 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 HSF2Q03933 536 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 ELP6Q0PNE2 266 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CNTN1Q12860 1018 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 GRB14Q14449 540 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 LTBP1Q14766 1721 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 TMEM132DQ14C87 1099 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 ACCSLQ4AC99 568 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 LRRC23Q53EV4 343 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 HSP90AB3PQ58FF7 597 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CT45A2Q5DJT8 189 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 SLC25A53Q5H9E4 307 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CES4AQ5XG92 561 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 OR4C11Q6IEV9 310 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 TMEM207Q6UWW9 146 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 GDPD4Q6W3E5 623 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 MEX3BQ6ZN04 569 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 EGFL6Q8IUX8 553 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CENPLQ8N0S6 344 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 SLC43A2Q8N370 569 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 PHYHIPQ92561 330 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 RAB7BQ96AH8 199 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 PINX1Q96BK5 328 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 RAB39BQ96DA2 213 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 MRPL38Q96DV4 380 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 C16orf58Q96GQ5 468 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 RBM18Q96H35 190 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 NEDD4LQ96PU5 975 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 PCDHB18PQ96TA0 734 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF665Q9H7R5 613 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 YY1AP1Q9H869 796 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 ECT2Q9H8V3 914 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 ACTR8Q9H981 624 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 YAE1D1Q9NRH1 226 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 LAMP5Q9UJQ1 280 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 POMT2Q9UKY4 750 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 PLCL2Q9UPR0 1127 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 RRP15Q9Y3B9 282 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 DDX49Q9Y6V7 483 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 RBBP6Q7Z6E9 1792 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 KIF7Q2M1P5 1343 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 TJP1Q07157 1748 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 ANGPT2O15123 496 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 CFLARO15519 480 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 B4GAT1O43505 415 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 PRKNO60260 465 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 TOM1L1O75674 476 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 CPNE6O95741 557 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 SLC2A2P11168 524 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 MBL2P11226 248 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 CD59P13987 128 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 RPL35AP18077 110 aaKnown RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 PAICSP22234 425 aaKnown RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 SOX6P35712 828 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 NLRP11P59045 1033 aaKnown RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 ABCE1P61221 599 aaKnown RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 TRA2BP62995 288 aaKnown RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 NUCB2P80303 420 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 SP3Q02447 781 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 PDIA5Q14554 519 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 KRTAP27-1Q3LI81 207 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 KRTAP24-1Q3LI83 254 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 XKR3Q5GH77 459 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 TECRLQ5HYJ1 363 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 OTUD3Q5T2D3 398 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 ATAD3BQ5T9A4 648 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 STPG1Q5TH74 334 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 CYP4V2Q6ZWL3 525 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 ARMCX2Q7L311 632 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 AMZ2Q86W34 360 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 DCUN1D3Q8IWE4 304 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 KIRREL3Q8IZU9 778 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 CERS5Q8N5B7 392 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 OTUD6BQ8N6M0 293 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 COLGALT1Q8NBJ5 622 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 OR52B4Q8NGK2 314 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 OR10T2Q8NGX3 314 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 GIPC3Q8TF64 312 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 TCP11Q8WWU5 503 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 TM9SF4Q92544 642 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 MAGED4Q96JG8 741 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 GPR137Q96N19 417 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 S1PR3Q99500 378 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 AGPAT1Q99943 283 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 TRIM6Q9C030 488 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 SLC26A1Q9H2B4 701 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 DPEP3Q9H4B8 488 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 SDF2L1Q9HCN8 221 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 IL20RAQ9UHF4 553 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 ERRFI1Q9UJM3 462 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 PILRAQ9UKJ1 303 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 ELF5Q9UKW6 265 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-217ENST00000541578 SMC3Q9UQE7 1217 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 NIP7Q9Y221 180 aaKnown RBP eCLIP3.73□□□□□ -1.814e-44■■■■■ 26.8
SNHG1-217ENST00000541578 ADAMTS7Q9UKP4 1686 aa3.73□□□□□ -1.81
SNHG1-217ENST00000541578 ABCC4O15439 1325 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 TMEM89A2RUT3 159 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms