RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 COPZ1P61923 177 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 HSPB3Q12988 150 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 SLAMF1Q13291 335 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 ENTPD8Q5MY95 495 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 C1orf94Q6P1W5 598 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 ZNF793Q6ZN11 406 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 DEF8Q6ZN54 512 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 TAGAPQ8N103 731 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 LINC01555Q8NAE3 123 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 SYT14Q8NB59 555 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 PPP1R16AQ96I34 528 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 ACAT2Q9BWD1 397 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 POLR2J3Q9H1A7 115 aaKnown RBP9.01□□□□□ -0.97
CNOT4-212ENST00000541284 PELI2Q9HAT8 420 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 TAS2R7Q9NYW3 318 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 CARD8Q9Y2G2 431 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 GRIP1Q9Y3R0 1128 aa9.01□□□□□ -0.97
CNOT4-212ENST00000541284 RPL36Q9Y3U8 105 aaKnown RBP9.01□□□□□ -0.97
CNOT4-212ENST00000541284 ANKDD1BA6NHY2 528 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 LCMT2O60294 686 aaKnown RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 OR10H3O60404 316 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 CXCL14O95715 111 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 FAM157BP0CG42 384 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 DDX6P26196 483 aaKnown RBP eCLIP9□□□□□ -0.97
CNOT4-212ENST00000541284 PCYT1AP49585 367 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 RORCP51449 518 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 MAPK12P53778 367 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 CNTN1Q12860 1018 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 ASAH1Q13510 395 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 PLPP4Q5VZY2 271 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 FBXO46Q6PJ61 603 aaPredicted RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 CD200R1LQ6Q8B3 271 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 TRMT11Q7Z4G4 463 aaKnown RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 ETFBKMTQ8IXQ9 262 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 OR6T1Q8NGN1 323 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 GLIPR2Q9H4G4 154 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 ABCB9Q9NP78 766 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 TP53BP1Q12888 1972 aaPredicted RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 A0A1W2PS29 197 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 SHISA3A0PJX4 238 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 PDZK1P1A8MUH7 402 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 PRKRAO75569 313 aaKnown RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 SNRNP200O75643 2136 aaKnown RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 LALBAP00709 142 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 RPS25P62851 125 aaKnown RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 KRR1Q13601 381 aaKnown RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 HEPACAMQ14CZ8 416 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 DHCR24Q15392 516 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 Q5BKY6 102 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 ZNF628Q5EBL2 1059 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 TMEM240Q5SV17 173 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 VASNQ6EMK4 673 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 FAM92BQ6ZTR7 304 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 SUN3Q8TAQ9 357 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 CAPSLQ8WWF8 208 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 UBE2E3Q969T4 207 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 TMCO6Q96DC7 493 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 POLR2J2Q9GZM3 115 aaKnown RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 OR51I1Q9H343 314 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 DDX31Q9H8H2 851 aaKnown RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 MARCH7Q9H992 704 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 NEUROD4Q9HD90 331 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 FGF20Q9NP95 211 aaPredicted RBP9□□□□□ -0.97
CNOT4-212ENST00000541284 SEMA3GQ9NS98 782 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 TAC3Q9UHF0 121 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 TMEM98Q9Y2Y6 226 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 CMAHPQ9Y471 501 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 DOCK9Q9BZ29 2069 aa9□□□□□ -0.97
CNOT4-212ENST00000541284 OTOL1A6NHN0 477 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 KPNA3O00505 521 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 IL1AP01583 271 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 CXCR2P25025 360 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 PTGER1P34995 402 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 GIPRP48546 466 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 MANFP55145 182 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 DEFA1P59665 94 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 DEFA3P59666 94 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 HOXC5Q00444 222 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TARDBPQ13148 414 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■■■■■ 30
CNOT4-212ENST00000541284 COL9A2Q14055 689 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 RAET1GQ6H3X3 334 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ABI3BPQ7Z7G0 1075 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 HMGN2P46Q86SG4 172 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 MEX3DQ86XN8 651 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 RDH10Q8IZV5 341 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 CLDN22Q8N7P3 220 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ZNF557Q8N988 423 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ST13P5Q8NFI4 369 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 AMDHD1Q96NU7 426 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 MED18Q9BUE0 208 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ACSS1Q9NUB1 689 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 LIPT1Q9Y234 373 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 WBP11Q9Y2W2 641 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 STK25O00506 426 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 MYCP01106 439 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 EPHX1P07099 455 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 LIMS3P0CW19 117 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 LIMS4P0CW20 117 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 AZGP1P25311 298 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms