RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 GPR15P49685 360 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 MC2RQ01718 297 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 DUSP4Q13115 394 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ANKRD39Q53RE8 183 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 C3orf38Q5JPI3 329 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 TCTE1Q5JU00 501 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 LIPKQ5VXJ0 399 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 HAGHLQ6PII5 290 aaPredicted RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 TMEM91Q6ZNR0 172 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ASPGQ86U10 573 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ZFP82Q8N141 532 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CAMKVQ8NCB2 501 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 SPATA22Q8NHS9 363 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 TMEM163Q8TC26 289 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ELP5Q8TE02 316 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 KCTD13Q8WZ19 329 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 EXOSC8Q96B26 276 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 NARS2Q96I59 477 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 TMEM68Q96MH6 324 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 LATS2Q9NRM7 1088 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 TREX1Q9NSU2 369 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 RPS6KA6Q9UK32 745 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 POLR3HQ9Y535 204 aaPredicted RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 ARGFXA6NJG6 315 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 SULT1C2O00338 296 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 DCLK1O15075 740 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 SDC3O75056 442 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 CA3P07451 260 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 BTCP35070 178 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 CTNNB1P35222 781 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 SNTB1Q13884 538 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 GRIN2CQ14957 1233 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 FAM174BQ3ZCQ3 159 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 KIAA0930Q6ICG6 404 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 SLC8B1Q6J4K2 584 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 CCDC117Q8IWD4 279 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 LNX2Q8N448 690 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 BMPERQ8N8U9 685 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 OR52P1PQ8NH57 321 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 SCAMP5Q8TAC9 235 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ADAMTS14Q8WXS8 1223 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 CNOT9Q92600 299 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 TMEM203Q969S6 136 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ELMOD3Q96FG2 381 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 DDOQ99489 341 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 FEVQ99581 238 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 WDR77Q9BQA1 342 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ABCG5Q9H222 651 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 BACE2Q9Y5Z0 518 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 A0A1B0GV90 55 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ZNF729A6NN14 1252 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 LANCL1O43813 399 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 PRKRAO75569 313 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 CCNDBP1O95273 360 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 JCHAINP01591 159 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 SEMG1P04279 462 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 URODP06132 367 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 CHRM5P08912 532 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 USP17L7P0C7H9 530 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 HPGDP15428 266 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 FPR3P25089 353 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 PTBP1P26599 531 aaKnown RBP eCLIP8.99□□□□□ -0.972e-7■■■□□ 17.6
CTNNA1-243ENST00000540387 PBX2P40425 430 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 BDKRB1P46663 353 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 POU3F4P49335 361 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 FNTBP49356 437 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 PGDP52209 483 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 EPHA4P54764 986 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ITGA1P56199 1179 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ZP1P60852 638 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 TSNQ15631 228 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ST3GAL2Q16842 350 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ANKS6Q68DC2 871 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 AFTPHQ6ULP2 937 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 L3MBTL4Q8NA19 623 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 BEST4Q8NFU0 473 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 DMBX1Q8NFW5 382 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 CHTF18Q8WVB6 975 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 KCNJ9Q92806 393 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 MTFMTQ96DP5 389 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 FUBP3Q96I24 572 aaKnown RBP eCLIP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 PPP3R2Q96LZ3 170 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ATOH8Q96SQ7 321 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 TBL1YQ9BQ87 522 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 PRKD2Q9BZL6 878 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 ULBP1Q9BZM6 244 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 POLR2J2Q9GZM3 115 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 METTL17Q9H7H0 456 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 UFSP2Q9NUQ7 469 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 C14orf105Q9NVL8 296 aa8.99□□□□□ -0.97
CTNNA1-243ENST00000540387 TRBV5-3A0A0A0MS03 114 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CARNS1A5YM72 827 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 ANKDD1BA6NHY2 528 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SUPT3HB4E1H0 165 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 L7N2F9 121 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 LILRB3O75022 631 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 MT-CYBP00156 380 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 ALDOBP05062 364 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CD63P08962 238 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms