RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SLC15A1P46059 708 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 UGT2B15P54855 530 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 OLR1P78380 273 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 SYT16Q17RD7 645 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 PGBD2Q6P3X8 592 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 CD300LDQ6UXZ3 194 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 DCDC5Q6ZRR9 648 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 LACC1Q8IV20 430 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 CCDC116Q8IYX3 515 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 TMCO5AQ8N6Q1 288 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 ZHX1-C8orf76Q96EF9 292 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 WFDC6Q9BQY6 131 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 SLIRPQ9GZT3 109 aaKnown RBP16.9■□□□□ 0.3
GNE-204ENST00000539208 CLEC1BQ9P126 229 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 FBXW2Q9UKT8 454 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 SLC9A8Q9Y2E8 581 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 CASC3O15234 703 aaKnown RBP16.89■□□□□ 0.3
GNE-204ENST00000539208 EMC8O43402 210 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 AIREO43918 545 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 LGI1O95970 557 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 HMGN2P05204 90 aaKnown RBP16.89■□□□□ 0.3
GNE-204ENST00000539208 CERS1P27544 350 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 RPS15AP62244 130 aaKnown RBP16.89■□□□□ 0.3
GNE-204ENST00000539208 PRR5P85299 388 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 ALDH6A1Q02252 535 aaKnown RBP16.89■□□□□ 0.3
GNE-204ENST00000539208 ADAM15Q13444 863 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 NFATC4Q14934 902 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 TMEM201Q5SNT2 666 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 C18orf63Q68DL7 685 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 C12orf73Q69YU5 71 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 NLGN4XQ8N0W4 816 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 SLC7A13Q8TCU3 470 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 OR1E3Q8WZA6 343 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 SLC22A18Q96BI1 424 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 SIPA1Q96FS4 1042 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 DACH2Q96NX9 599 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 ALOXE3Q9BYJ1 711 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 TWSG1Q9GZX9 223 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 SYNPO2LQ9H987 977 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 SLC25A19Q9HC21 320 aa16.89■□□□□ 0.3
GNE-204ENST00000539208 TLR4O00206 839 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 UGT2B17O75795 530 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 APBB3O95704 486 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 ASGR2P07307 311 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 CHRM4P08173 479 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 CTHP32929 405 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 PRKAG1P54619 331 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 DUSP2Q05923 314 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 FUT5Q11128 374 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 COX10Q12887 443 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 LEXMQ3ZCV2 418 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 TJAP1Q5JTD0 557 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 ZNF367Q7RTV3 350 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 COMTD1Q86VU5 262 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 OR4E2Q8NGC2 313 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 ABTB1Q969K4 478 aaPredicted RBP16.89■□□□□ 0.29
GNE-204ENST00000539208 GAL3ST3Q96A11 431 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 RIPOR3Q96MK2 946 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 Q96MT0 163 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 ZNF681Q96N22 645 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 SLC28A3Q9HAS3 691 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 KCNK12Q9HB15 430 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 GIMAP4Q9NUV9 329 aa16.89■□□□□ 0.29
GNE-204ENST00000539208 M0R129 80 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 ASNA1O43681 348 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 CNOT3O75175 753 aaKnown RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 EML2O95834 649 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 EGFP01133 1207 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 PTHP01270 115 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 POU1F1P28069 291 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 CLK1P49759 484 aaKnown RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 RAB8AP61006 207 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 NDUFA9Q16795 377 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 RGS21Q2M5E4 152 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 ENPP7Q6UWV6 458 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 NT5CQ8TCD5 201 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 WDR92Q96MX6 357 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 PINK1Q9BXM7 581 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 POLR2J3Q9H1A7 115 aaKnown RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 C3orf14Q9HBI5 128 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 TOR1BO14657 336 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 SCAMP1O15126 338 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 EPPINO95925 133 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 RPLP0P05388 317 aaKnown RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 LIMK1P53667 647 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 CLDN2P57739 230 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 SFSWAPQ12872 951 aaKnown RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 ITGADQ13349 1161 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 PIN1Q13526 163 aaPredicted RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 LASP1Q14847 261 aaKnown RBP16.88■□□□□ 0.29
GNE-204ENST00000539208 RAB30Q15771 203 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 ZNF750Q32MQ0 723 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 PLAG1Q6DJT9 500 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 VN1R4Q7Z5H5 301 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 MFSD4AQ8N468 514 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 FNDC11Q9BVV2 318 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 DCSTAMPQ9H295 470 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 ZNF624Q9P2J8 865 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 531.3 ms